Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02053 ATGAAGGTTTCAAATCGAATGTTCACAATCGGTCTAATCTCATCATGGTACACATCAAACATTGGCGTACTCTTACTCAACAAGTACCTCCTAAGCAACTACGGATTCAAGTACCCAATCTTCCTAACCATGTGCCACATGACGGCTTGTTCGTTGTTCAGCTACGTCGCGATTGCGTGGCTCAAAATGGTTCCAATGCAAACCATTCGGTCTCGCCTTCAGTTTTTCAAGATCGCTACTCTGAGTTTGGTTTTCTGTGTTTCTGTGGTTTTTGGGAATGTGTCGTTGAGGTATCTTCCGGTGTCGTTTACGCAAGCTGTCGGTGCTACTACGCCTTTTTTTACTGCCGTTTTTGCTTACTTTATGACGTTTAAAAGAGAGGCGTGGCTTACTTATCTTGCGCTCCTTCCTGTTGTTACTGGTGTTATTTTTGCTAGTGGGGGTGAACCAAGCTTTCATTTGTTTGGGTTCATAATATGTGTTGCAGCTACAGCGGCACGAGCCCTAAAATCAGTGTTACAAGGAATTTTACTTTCGTCTGAAGGGGAGAAGCTAAATTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTTGTTTTCCTTCTTCCCGCTACACTTTATATGGAAGAAAATGTGGTTGGCATCACATTGGCTCTTGCTAGAGATGATGTGAAGATCATTTGGTATCTTCTGTTTAATTCCTCACTTGCATATTGTGTCAACTTGACCAATTTCTTGGTCACAAAACACACCAGTGCTCTCACCCTTCAGGTACTCGGGAATGCTAAAGGCGCTGTAGCAGTCGTAGTTTCAATTCTGATATTTAGAAACCCAGTTTCAGTCACTGGAATGATGGGTTATTCACTTACAGTCCTCGGAGTTGTTCTTTACAGCGAAGCCAAAAAGAGAAGCAAGTGA 921 0.4289 MKVSNRMFTIGLISSWYTSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWLKMVPMQTIRSRLQFFKIATLSLVFCVSVVFGNVSLRYLPVSFTQAVGATTPFFTAVFAYFMTFKREAWLTYLALLPVVTGVIFASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLYMEENVVGITLALARDDVKIIWYLLFNSSLAYCVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVLGVVLYSEAKKRSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02053 306 PANTHER SOLUTE CARRIER FAMILY 35 10 303 - -
Vivi7g02053 306 Pfam Triose-phosphate Transporter family 12 299 IPR004853 -
Vivi7g02053 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 148 - -
Vivi7g02053 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02053 Vivi-Chr7 82493681 82496852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02053 1 306 Organic Solute Cotransporters AT3G11320 87.013 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02053 - - gmx:100806704 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04267 3 76215197 76219778 Vivi7g02053 7 82493681 82496852 ECH
Vivi7g02053 7 82493681 82496852 Vivi7g02053 7 82493681 82496852 ECH
Vivi3g04267 3 76215197 76219778 Vivi7g02053 7 82493681 82496852 PCT