Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04267 ATGTCTCAAATTACTCTCATATCTCCAGCAACTCTCATAGCTATTACTGGCATGAGGAAGAAACTTGGTGAAATATCTGCTGCAAATGGAAGGTACAAATTGAGCTCACTATCATCACAACCACATGTTAATTGGAATATTCAAAGGCATATTCCATGGTTTGGTTTCAATAATTCATCAAAGTATTATTATTCATATGGGAAGAATAATATAAGTTCTATTGTGAATGTTTCTGATGGAGGAGCCATCTCTGTTCCTCATGGTTGGCCTCTTGAAAAGGTTTCTGACGATGAAAAGGGTTCCAAAATGAAGGGTTCAAGCCGTTTCTTCACAATAGGACTCGTAGCAGCATGGTACTCTTCCAACATTGGTGTTCTTCTATTGAACAAGTACTTGCTCAGCAACTATGGATTCAAGTATCCTATTTTTCTCACCATGTGTCACATGACAGCGTGCTCTTTGTTTAGCTATGTTGCTATAGCTTGGTTGAAGATTGTCCCTATGCAAACGATTCGATCCAGGGTTCAGTTCTTCAAGATCTCGGCTTTGAGTCTTATTTTCTGTGTTTCTGTTGTGTTTGGGAATATTTCTCTTCGTTATCTGCCTGTGTCTTTTAATCAGGCTATTGGTGCTACTACGCCTTTTTTTACTGCCATTTTTGCTTATATTATGACCTTTAAGAGAGAGGCTTGGCTCACTTATTTCACCCTTGTTCCTGTTGTTACTGGTGTTGTCATTGCTAGTGGGGGTGAACCGAGTTTCCATTTATTTGGATTCATTATATGTATTGCGGCCACAGCTGCAAGAGCCTTAAAATCAGTACTACAAGGAATTTTGCTGTCTTCAGAAGGAGAGAAGCTGAATTCGATGAACCTCCTCCTTTACATGGCTCCTATGGCTGTAGTTTTCCTTCTCCCTGCTACACTTATAATGGAAGAAAATGTGGTTGGCATTACATTGGCTCTCGCCAGAGACGATGTCAAGATAATTTGGTATCTGCTGTTTAACTCGGCTCTTGCGTATTTTGTCAACCTGACCAATTTTTTGGTCACGAAACATACTAGTGCTCTGACCCTTCAGGTACTAGGGAATGCTAAAGGCGCTGTAGCAGTAGTTGTTTCGATTCTAATATTCAGAAACCCAGTTTCAGTCACTGGAATGATGGGTTACGCGCTCACAGTCTTTGGAGTAATACTTTACAGCGAAGCCAAAAAGCGAACAAAGTGA 1227 0.4034 MSQITLISPATLIAITGMRKKLGEISAANGRYKLSSLSSQPHVNWNIQRHIPWFGFNNSSKYYYSYGKNNISSIVNVSDGGAISVPHGWPLEKVSDDEKGSKMKGSSRFFTIGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWLKIVPMQTIRSRVQFFKISALSLIFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAIFAYIMTFKREAWLTYFTLVPVVTGVVIASGGEPSFHLFGFIICIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYALTVFGVILYSEAKKRTK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04267 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 299 402 - -
Vivi3g04267 408 PANTHER SOLUTE CARRIER FAMILY 35 111 405 - -
Vivi3g04267 408 Pfam Triose-phosphate Transporter family 114 401 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04267 Vivi-Chr3 76215197 76219778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04267 102 408 Organic Solute Cotransporters AT3G11320 90.879 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04267 - - gmx:100785614 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04267 3 76215197 76219778 Vivi7g02053 7 82493681 82496852 ECH
Vivi3g04267 3 76215197 76219778 Vivi3g04267 3 76215197 76219778 ECH
Vivi3g04267 3 76215197 76219778 Vivi7g02053 7 82493681 82496852 PCT