LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g01963	ATGGGACATGCAAAGTTGCAAATGCAAACTGGTATCGATACAATGGAAGAGGAAGCTGGGCAGTGTGCTGCGGGTTTTCCTAGCAGAACTACTGTGGCGTGCATGATCAATGCAGAAATTGGTGCTGTTTTGGCAGTCATGCGAAGAAATGTTAGATGGGGTGTTCATTATATGTCAGACGAAGATCAATTAGAGCACTCTCTTGTTCAGTCTTTAAAGAACTTAAGAAGGCAGATTTTTTCGTGGCAGAGTCATTGGCATGTCATAGACCCTGTCTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCGGATGAAACTGGTGCACCAATTACTGGTGTTGCTCTGTCATCTGTTTACAAGATCTTAACTCTGGATGTAATTGATCAGAGCACTGTCAATGTTGGGGATGCTATGCACTTGGTAGTTGATGCTGTCACAAGTTGTAGATTTGAGGTGACTGATCCAGGATCAGAAGAAGTGGTATTAATGAAGATATTACAAGTTTTTTTGGCATGTGTGAAAAGTAAAGCATCTGTAATGCTGAGTAATCAACATATCTGCACCATAGTAAACACCTGTTTCCGTATAGTTCATCAAGCAGGAACCAAAAGTGAGTTGTTGCAGAGGATAGCACGCTACACAATGCATGAACTTGTTCGGTCTATTTTCTGTCACCTTCAAGACATTGACGTCACAGAGCATGCATTTGTAAATGGGAGCACTGCTTTAAAAGAAGAGGGACAGATTGATGATGTGAAAAATGAGCATCATTCTACAAACACACAATTGGAAAATGGTAGCTTGATTTCTGCAAGTGATAGTCAATCTGTATCCACAGGCATTGCTTCTAATATTGTGAGTGATGCGGCAGCCATTATAGTGGATGCAAACACAGCTGCGAGCAGTGGCAAGGAGACTGATCTGAATGAACAGCTCATGAATGAACCACATGGGATTCCATGCATGCTGGAAATATTTCACTTCTTGTGTTCACTCTTGAACGTTGCTGAGCATATGGGAATGAGTCCTCGGTCAAACACAATAGCATTTGATGAAGACGTTCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATAGAATTGGGAGGTTCTTCTTTTCACCGACACCCTAGGTTGTTGAGCATAATTCAGGATGAATTATTCTGTAATCTTATGCAATTTGGTTTGTCAATGAGTCCCCTTGTACTTTCCATGGTAAGTAGCATTGTTTTAAATTTGTATCATCATCTTCGTACAGAACTCAAGTTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAATATGGGGCTTCATATCAACAACAGGAAGTAGCCATGGAGGCACTTGTTGACTTCTGCCGGCAAAAAGCATTCGTAGTGGAGATGTATGCTAACTTTGATTGTGACACGACTTGTAGTAATATCTTTGAAGACATTGCTAATTTGTTGTCCAAGAGTGCTTTTCCTGTGAACAGTCCATTATCTTCCATGAATATTCTTGCTTTGGATGGTCTTATTGCTATAATACAAGGAATGGCTGAAAGGATAGGTAAAGGATCTTTGAGTTCAGCACATTCTATTGAGAATCTTGAAGAGTATACTCCATTCTGGCTTGAAAATTGTGAAAACTTCACTGATCCAAATAATTGGGTTCCTTTTGTTGGTCGAAGAAAGCACTTCAAGAAAAAGTTGATGATTGGAGCCGATCATTTTAATCGTGATGCCAAGAAAGGTCTTCAGTTTCTCCAAGGAATGCATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTCTTTTTTCAGATACACTATTGGGTTGGATAAGAATCTCATTGGTGATTACCTTGGACACCATGATGAGTTCTGTGTTCAGGTTCTTCATGAATTTGCTAGAACATTTGATTTCAAAGACATGGCATTAGATTCAGCTCTGCGTATATTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAGAAGATCCAGAGGGTGCTTGAAGCTTTCTCAGAGAGATATTATGAGCAGTCACCAAATATCCTAGCTAACAAGGATGCCGCTCTCTTGTTATCTTATTCAATTATATTGCTTAATACAGATCATCACAATTCACAGGTCAAAAAGAAGATGACAGAAGAAGATTTTGTCCGAAATAATAGGCAAATAAATGGTGGCAATGATCTACCCCGAGAAGTCCTGTCTGGGCTATATCATTCAATTTGTAAAAGTGAGATCCAGACAACTCCTGAGCAAGGTTCCGCTTTTCCTGAAATGACCCCAAGTCGTTGGATTTATCTCATAAACAAGTCAAAAGACACAGCTCCCTTCATTGTTTCTGATTGCAGAGCACACCTTGATTATGATATGTTTGCCATATTGTCCGGTCCAACTGTTGCTGCCATTTCTGTGGTATTTGACAATGCTGAAACTGAAGAGGTGTATCAAACATGTATGGATGGATTCTTAGCTGTTGCTAAGGTATCAGCTTATTATCATCTTGATAGTGTACTAGATGATTTGGTTGTGTCACTTTGTAAGTTCGTCACTATTTTGGATCCTTTATCTCCCGAGGAGTCAATTTTAGCCTTCGGAGAGGACACAAAAGCAAGAATGGCAACTGAGACTGTTTTCACTATTGCGAATAGGTATGGTGATTACATCCGCACAGGGTGGAGGGATATTCTTGATTGTATTTTAAAATTTCAGAAGTTAGGTCTTCTTCCTGCTCAAATGGCCAATGATGCGGCCGAAGAGTCAGAAACTTCCACAGAAACTGGGAATGGAAAACGCAATGCTAACTCTTTATCTTCATCTCAGCTTTTATCTGTTAGTACTCCAAAGAGATCTTCAGGATTGATCAGCAGGTTTAGTCAACTCTTATATCTTGGTGCTGAAGAGACAAAATCAGTACCATCTGAAGAACAAGTTGCTGCTCAACAGTGTTGCCTTCAAACAATTCAGAAGTGTCACATTGAGAGCATATTTACCGAGAGTAAGTTTTTGCAAGCTGAATCTCTATTGCACCTTGCAAAAGCACTCAAAAGCGCAGGAGTGAAACCGAAGAAAGGGAACAACACATCCGAGGACGAAGATACTTCAGTTTTCTGCTTGGAATTACTGGTAGCAATCACTCTGAATAACCGAGATAGAATTGAACTTCTTTGGCCGGATGTTTATGAGCATATTTCCAATATTGTGCAATCAACCGTGATGCCTTGTGCACAGGTAGAGAAGGCCGTTTTTGGACTCTTAAGGATTTGCCATCGCTTACTTCCTTACAAAGAGAACATTACCGACGAACTTTTACGGTCCCTGCAACTTGTCCTGAAGCTTGACGCACGGGTCGCTGACTCATACTATGAACAGATTACACAGGAAGTTAGTAACCTTGTGAAGGCGAATGCTTCTCATATTAGATCTCAGCTAGGTTGGCGGACAATAACATCACTGCTTTCCATCACTGCTAGACACTTGGAATCGTCCGAGGCTGGATTCGATGCATTGTTTTTCATTATGTCAGATGGAGCCCACATACTCCCAGCTAATTTTGTTCTCTGTGTAGATGCTGCAAAGCAATTTGCCGAGTCTCGTGTTGGACAGGTTGAGCGGTCTGTAGTGGCACTTGATCTAATGGCAGGGTCGGTCAATTGTCTTGAGAAGTGGACTAATGACGCTAAGGAAGCAATGACAGAAGAAGAAGTGGCAAAGATGTTGCAGGATATTGGGGATATGTGGTTGAGACTCATACAGGGACTAAAAAAACTAAGTTTGGACCAAAGAGAAGAGGTTCGAAACCATGCGTTGTTATCGTTGCAGAATTGCTTAACAGGATCCGTTGCGATTCATCTTCCACATGACTTGTGGTTACAATGTTTTGATCAAGTCATCTTCACCGTGCTTGATGACCTGCTTGAAATTTCTCAGACACACTCTCAAAAGGACTACCGGAACATGGAAGGAACACTTATTCTTGCCTTGAAGCTCTTGTCTAAAGTTTTTCTCTTGTTACTCCAAGACCTATCTCAATCTACAGACTTCAGCAAATTATGGTTGGGTGCGTTAAGTCGTTTCGAAATATTTATGAATGTGAAAATTAGGGGAAGGAGAAGCGAGAAGCTTCAAGAGCTTGTACCCGAGCTTCTCAAGAACACTTTGCTTGTTATGAAAGCTAGACGCGTACTAGAGAGAAGCAGTAGTAGTGGTGATGGTAATAGTTTATGGGAACTGACATGGCTGCATATAAATAATATCGACCCGTCATTACAATCCGAGGTGTTCCCTGAGCAAGATTCAAAGCAATTGGAGCAGAAACAGACTGAACAAGTTGGAGATAGAGGGTCTGCTGAAAATGTTTCTGTGCATTCAAAAGAAGCAGCAGACCAAGACGGTACTGGTAACTGTGTCGGTTAA	4428	0.4094	MGHAKLQMQTGIDTMEEEAGQCAAGFPSRTTVACMINAEIGAVLAVMRRNVRWGVHYMSDEDQLEHSLVQSLKNLRRQIFSWQSHWHVIDPVLYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQSTVNVGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVFLACVKSKASVMLSNQHICTIVNTCFRIVHQAGTKSELLQRIARYTMHELVRSIFCHLQDIDVTEHAFVNGSTALKEEGQIDDVKNEHHSTNTQLENGSLISASDSQSVSTGIASNIVSDAAAIIVDANTAASSGKETDLNEQLMNEPHGIPCMLEIFHFLCSLLNVAEHMGMSPRSNTIAFDEDVPLFALTLINSAIELGGSSFHRHPRLLSIIQDELFCNLMQFGLSMSPLVLSMVSSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVAMEALVDFCRQKAFVVEMYANFDCDTTCSNIFEDIANLLSKSAFPVNSPLSSMNILALDGLIAIIQGMAERIGKGSLSSAHSIENLEEYTPFWLENCENFTDPNNWVPFVGRRKHFKKKLMIGADHFNRDAKKGLQFLQGMHLLPDKLDPQSVASFFRYTIGLDKNLIGDYLGHHDEFCVQVLHEFARTFDFKDMALDSALRIFLETFRLPGESQKIQRVLEAFSERYYEQSPNILANKDAALLLSYSIILLNTDHHNSQVKKKMTEEDFVRNNRQINGGNDLPREVLSGLYHSICKSEIQTTPEQGSAFPEMTPSRWIYLINKSKDTAPFIVSDCRAHLDYDMFAILSGPTVAAISVVFDNAETEEVYQTCMDGFLAVAKVSAYYHLDSVLDDLVVSLCKFVTILDPLSPEESILAFGEDTKARMATETVFTIANRYGDYIRTGWRDILDCILKFQKLGLLPAQMANDAAEESETSTETGNGKRNANSLSSSQLLSVSTPKRSSGLISRFSQLLYLGAEETKSVPSEEQVAAQQCCLQTIQKCHIESIFTESKFLQAESLLHLAKALKSAGVKPKKGNNTSEDEDTSVFCLELLVAITLNNRDRIELLWPDVYEHISNIVQSTVMPCAQVEKAVFGLLRICHRLLPYKENITDELLRSLQLVLKLDARVADSYYEQITQEVSNLVKANASHIRSQLGWRTITSLLSITARHLESSEAGFDALFFIMSDGAHILPANFVLCVDAAKQFAESRVGQVERSVVALDLMAGSVNCLEKWTNDAKEAMTEEEVAKMLQDIGDMWLRLIQGLKKLSLDQREEVRNHALLSLQNCLTGSVAIHLPHDLWLQCFDQVIFTVLDDLLEISQTHSQKDYRNMEGTLILALKLLSKVFLLLLQDLSQSTDFSKLWLGALSRFEIFMNVKIRGRRSEKLQELVPELLKNTLLVMKARRVLERSSSSGDGNSLWELTWLHINNIDPSLQSEVFPEQDSKQLEQKQTEQVGDRGSAENVSVHSKEAADQDGTGNCVG	1475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g01963	1475	Gene3D	-	644	761	IPR023394	-
	Vivi7g01963	1475	MobiDBLite	consensus disorder prediction	1432	1475	-	-
	Vivi7g01963	1475	Pfam	Sec7 domain	568	751	IPR000904	GO:0005085\|GO:0032012
	Vivi7g01963	1475	FunFam	ARF guanine-nucleotide exchange factor GNOM	561	643	-	-
	Vivi7g01963	1475	CDD	Sec7	568	751	IPR000904	GO:0005085\|GO:0032012
	Vivi7g01963	1475	PANTHER	GUANYL-NUCLEOTIDE EXCHANGE FACTOR	87	1437	-	-
	Vivi7g01963	1475	MobiDBLite	consensus disorder prediction	921	945	-	-
	Vivi7g01963	1475	FunFam	ARF guanine-nucleotide exchange factor GNOM-like	643	761	-	-
	Vivi7g01963	1475	SUPERFAMILY	ARM repeat	875	1339	IPR016024	-
	Vivi7g01963	1475	ProSiteProfiles	SEC7 domain profile.	560	749	IPR000904	GO:0005085\|GO:0032012
	Vivi7g01963	1475	SUPERFAMILY	Sec7 domain	564	757	IPR035999	GO:0005085\|GO:0032012
	Vivi7g01963	1475	Gene3D	-	561	643	-	-
	Vivi7g01963	1475	Pfam	Guanine nucleotide exchange factor in Golgi transport N-terminal	321	482	IPR032691	-
	Vivi7g01963	1475	SMART	sec7_5	564	751	IPR000904	GO:0005085\|GO:0032012

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g01963	Vivi-Chr7	79974428	79981492	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g01963	K18443		-	gmx:100784083	2365.5

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi7g01963	7	79974428	79981492	Vivi3g04203	3	73989861	73995622	PCT