Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04203 ATGGGACATTTAAAGATGCAAATGCCAGCTGGTCTCAATGGAATAGAGGATCAATCGGAGCAATGTGGTGCGGGATATCCTAACAAAACTACTATAGCGTGCATGATCAATGCAGAGATTGGTTCTGTTTTGGCAGTGATGCGAAGAAATGTTAGATGGGGAGTTCATTATATGTCGGATGATGACCAGTCAGAGCACTTCCTCGTTCAGTCTTTGAAGACGCTGAGAAGACAGATTTTTTCATGGCAGAAGCAATGGCATTCCATCAACCCTGCCTTATATCTCCAGCCTTTTCTTGATGTGATTCAATCAGATGAGACCGGCGCACCGATCACTGGTGTTGCTTTGTCATCGGTATACAAGATCTTAACGCTGGATGTGATTGATCAAAACACGGTTAATGTTGTTGATACCATGGACTTGGTGGTTGATGCTGTCACAAGTTGTAGATTTGAGGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTACAAGTTCTTCTAGCATGCGTGAAAAGTAAAGCATCAGTAATACTTAGTAACCAACACATTTGCACTATAGTGAATACTTGCTTCCGTATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTGCAGCGAATAGCTCGATATACAATGCATGAACTTGTTAGGTGTATCTTCTCCCACCTTCAAGAGATTGATATTGCAGAGAATTTATCTATTAATGGGACCACCACTTCAGAACAAGAGACCTGTGAGCTAAATAATGAGCATGTTCTGGAAAGCAGACAATTTGAAAATGGGAGTCTGACCTCTTCATATGATGGTCAACCATCAACCACGAGCCTTGCTTCTAGTACTGCATATATTGGTACAGAAACTGTAACGGCCGAAAACACTGCTACTGCTAGTAGTGACAAGGAGAGTGATCTACAAGAATTGCAGCTCATGACTGAACCATATGGAATTCCCTGTATGGTGGAGATATTTCACTTCTTGTGCTCTTTGTTGAATGTTGTTGAGCATATGGGAATGAATCCTAGATCAAATACACTAACATTTGACGAAGACGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATTGAGTTGGGAGGGCCTTCCTTTCGCCATCACCCTAGATTGCTGAGTTTAATTCAAGATGAAGTATTCCATATTCTTATGCAATTCGGTTTGTCTATGAGTCCTCTTGTACTTTCATTGGTATGTAGCATTGTTCTCAATTTGTATCACCATCTTCGGACAGAACTGAAATTACAGCTAGAAGCATTTTTTTCTTGTATAATTTTGAGGCTTGCACAAAGCAAATACGGGGTTTCATATCAGCAACAGGAGGTTTTGATGGAGGCACTTGTTGATTTGTGCAGACAAAAGACATTCATGCTGGAGATGTTTATTAACTTTGATTGTGACATTACTTGCAGTAATGTCTTTGAAGATATTGCTAATTTGTTGTCCAAAAGTGCTTTTCCAGTAAATAACCCATTATCCTCCATGCATATTCTTGCTTTGGATGGTCTAATTGCTGTAATGCAGGGAATGGCGGATAGGATAGGTAATGGATTTCTCAGCTCAGAACATTCTCCCGTGAATTTTGAAGAGTACATACCGTTCTGGCTGGAGCAGTGTGAAAATTTTGGTGATCCAAATGATTGGGTTCCTTTTGTCCGCCGAAGAAAGTACTTCAAGAGAAGATTGATGATTGGAGCCGATCACTTCAATCGTGATGCTAAGAAAGGCCTTGAGTTTCTCCAAGGAACGCATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTCTAAGATTCACCGCTGGGTTGGATAAAAATGTCATTGGTGATTTCTTAGGAAATCATGATGAATTATGTGTTCAGGTTCTTCCTGAATTTGCTAGAACATTTGATTTTCAAGATCTGACCTTAGACACAGCCCTGCGAATATTTTTGGAGACTTTTAGGCTTCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAAGCTTTTTCTGAGAGATATTATGAACAGTCACCAGATATCCTGGCTAACAAGGATGCTGCACTTGTGTTGTCATACTCCATTATAATGCTTAATACAGATCAGCATAATGTGCAGGTCAAAAAGAAGATGACGGAAGCAGATTTTATCAGGAATAATAGGCTCATAAATGGAGGCAAAGATCTACCTCGAGAATTCCTGTCAGAGATTTACCAGTCAATTTGTAAAAATGAAATCCGCACAACACCTGAATCAGGCTTTGGATCTCCTGGAATGAGCCCAAGTCGGTGGATTTCTCTAATACACAAGTCAAAAACAACTGCTCCATACATCGTATCTGATTCCCAAGCATACCTAGATTATGATATGTTTGTTATATTGTCAGGCCCAACAATCGCTGCCGTTTCTGTGGTATTTGATAATGCTGAAAATGAAGAGGTATACCAAACATGTATGGATGGATTCTTAGCTATTGCAAAGATATCGGCTTACTATCATCTTGAGAATGTTCTTGATGATCTGATTGTGTGCCTCTGTAAGTTCTTCACCATTTTGGATCCATTATCGGTTGAGGAATCTGTCCTGGCCTTCGGAGACGACACAAAAGCACGAATGGTAACTGAGACAGTTTTCACTATTGCAACTAAGTATGGTGATTACATCCGCACCGGTTGGAGGAATATTCTTGATTGCATCTTAAGATTGCACAAGTTAGGTCTTCTACCTACTCAATTGGCCAGTGATGCAGCTGACGAGTCAGAGCTTTCTACAAAAACTGGACATGGGAAACTTAATTTGCATTCTTTATCATCAAGCCGTCTTCGATCTATTAGCACTCCAAAGAAATCCTCAGGGTTATTGAGCAGGTTTAGTCAACTATTATCTCTTGCCACTGACGAGCCAAGAGCAATACCAACCGAAGAACAACTGGCCGCTCATCAGCAAGCTGTACAAACAATTCAAAAATGTCACATTGACAGCATATTCACTGAAAGTAAATTCCTGCAGGCTGAATCCTTATTGCAGCTCGTAAGATCACTCATCAAGGCTGGAGCTCAATCTCAGAAGGGGAACAAAAGATCTCAGAATGAAGACACTTCGGTTTTCTGCCTGGAATTACTGGTAGCAATCACTCTGAATAACAGGGATAGGATTGGGCTTATATGGAAAGGTGTTTATGACCACATATCTAATATAGTTAAATCCTCCGTGATGCCATGTGCACTGGTAGAAAAGGCTGTTTTCGGACTTCTAAGGATTTGCCATCGCTTACTTCCCTATAAAGAGAACATGGCTGATGAACTTTTGAAGTCACTGCAATTAATCTTGAAGCTTGATGCACTGGTTGCAGATGCATACTATGAGCAGATTACACGGGAAGTCAGCCGCCTCGTTAAGGCAAATGCGTCTCGCATTAGATCTCATTTAGGATGGCGGACAATTACGTCACTGCTTTCTGTCACTGCTAGACACCTGGAGGCATCCGAGATTGGATTTGATACGCTGTCATATATTATGTCTGATGGAACTCGCTTGCTCCCTGCTAACTATATTCTCTGTATAGATGCTGCGAGGCAGTTTGCCGAGTCTCGTGTAGGACTGGTGGATCGGTCCATCGTTTCACTGGATCTCATGTCAGGTTCTTTCCGTTGTTTACAAAAGTGGACTAGCGATGCAAAGCAAGCGGCAAAAGAAGAGGAAATGGAAAAGATGTTGCAGGATATTGGGGAAATGTGGTTGAGGTTAATACAAGGACTAAGGAAAGTATGTTTGGACCAAAGAGAGGAGGTTAGAAATCACGCGCTGTTATCTTTGCAGAAGTGTATGACAGAAGCTGTCGAAACCCATCTCCCATGTGATTTATGGTTACAATGTTTCGACCAAGTGATATTCCCTTTGCTGGACGACCTGCTTGATATTTCTCAGACACGTTCACAAAAGGACTACACTGACCTTGAAGAAACTCTTATTCTTGCCTTGAAGCTCTTATTCAATGTTTTCCTCCGATTACTCCAAGAACTATCGCAACTTGAAGCTTTCTGCAAACTATGGGTGGATGTTCTAAGCCATGCAGAAAAATACGCGAAGGTGAAAATAGGAGGAAGGAAAAGCGAGAAGCTTCAACTGCTTGTTCCCGAGCTTCTGAAGAACGCGCTGGCTGTTATGAAATCAGAAGGCATACTAGTGGATAGAAGTGGTTCAGGGGACAATAGTTTATGGGAACTGACATGGCTACATACGAAGAATATAGCTCCCTCATTGCAGTCCGAGGTGTTCCAAGAGCATAATTCAGAACAGTTGTTGCAGCAAAAGCAGATTGAAACAGTTGAAGATTTGGAACATGATGCATATGTTTTTGTTCCTGCAAATGAAACACTTGGTCAAGAAGGTTGA 4410 0.4132 MGHLKMQMPAGLNGIEDQSEQCGAGYPNKTTIACMINAEIGSVLAVMRRNVRWGVHYMSDDDQSEHFLVQSLKTLRRQIFSWQKQWHSINPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNVVDTMDLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASVILSNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQEIDIAENLSINGTTTSEQETCELNNEHVLESRQFENGSLTSSYDGQPSTTSLASSTAYIGTETVTAENTATASSDKESDLQELQLMTEPYGIPCMVEIFHFLCSLLNVVEHMGMNPRSNTLTFDEDVPLFALTLINSAIELGGPSFRHHPRLLSLIQDEVFHILMQFGLSMSPLVLSLVCSIVLNLYHHLRTELKLQLEAFFSCIILRLAQSKYGVSYQQQEVLMEALVDLCRQKTFMLEMFINFDCDITCSNVFEDIANLLSKSAFPVNNPLSSMHILALDGLIAVMQGMADRIGNGFLSSEHSPVNFEEYIPFWLEQCENFGDPNDWVPFVRRRKYFKRRLMIGADHFNRDAKKGLEFLQGTHLLPDKLDPQSVACFLRFTAGLDKNVIGDFLGNHDELCVQVLPEFARTFDFQDLTLDTALRIFLETFRLPGESQKIHRVLEAFSERYYEQSPDILANKDAALVLSYSIIMLNTDQHNVQVKKKMTEADFIRNNRLINGGKDLPREFLSEIYQSICKNEIRTTPESGFGSPGMSPSRWISLIHKSKTTAPYIVSDSQAYLDYDMFVILSGPTIAAVSVVFDNAENEEVYQTCMDGFLAIAKISAYYHLENVLDDLIVCLCKFFTILDPLSVEESVLAFGDDTKARMVTETVFTIATKYGDYIRTGWRNILDCILRLHKLGLLPTQLASDAADESELSTKTGHGKLNLHSLSSSRLRSISTPKKSSGLLSRFSQLLSLATDEPRAIPTEEQLAAHQQAVQTIQKCHIDSIFTESKFLQAESLLQLVRSLIKAGAQSQKGNKRSQNEDTSVFCLELLVAITLNNRDRIGLIWKGVYDHISNIVKSSVMPCALVEKAVFGLLRICHRLLPYKENMADELLKSLQLILKLDALVADAYYEQITREVSRLVKANASRIRSHLGWRTITSLLSVTARHLEASEIGFDTLSYIMSDGTRLLPANYILCIDAARQFAESRVGLVDRSIVSLDLMSGSFRCLQKWTSDAKQAAKEEEMEKMLQDIGEMWLRLIQGLRKVCLDQREEVRNHALLSLQKCMTEAVETHLPCDLWLQCFDQVIFPLLDDLLDISQTRSQKDYTDLEETLILALKLLFNVFLRLLQELSQLEAFCKLWVDVLSHAEKYAKVKIGGRKSEKLQLLVPELLKNALAVMKSEGILVDRSGSGDNSLWELTWLHTKNIAPSLQSEVFQEHNSEQLLQQKQIETVEDLEHDAYVFVPANETLGQEG 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04203 1469 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Vivi3g04203 1469 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Vivi3g04203 1469 FunFam ARF guanine-nucleotide exchange factor GNOM-like 643 761 - -
Vivi3g04203 1469 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Vivi3g04203 1469 FunFam ARF guanine-nucleotide exchange factor GNOM 561 643 - -
Vivi3g04203 1469 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Vivi3g04203 1469 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Vivi3g04203 1469 Gene3D - 561 643 - -
Vivi3g04203 1469 SUPERFAMILY ARM repeat 162 1360 IPR016024 -
Vivi3g04203 1469 Gene3D - 644 759 IPR023394 -
Vivi3g04203 1469 SUPERFAMILY Sec7 domain 565 752 IPR035999 GO:0005085|GO:0032012
Vivi3g04203 1469 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 75 1436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04203 Vivi-Chr3 73989861 73995622 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04203 K18443 - gmx:100802024 2317.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01963 7 79974428 79981492 Vivi3g04203 3 73989861 73995622 PCT