Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01933 ATGGCTCATTGTTCTGTCAAGGATACCGGTATAACGGTATCCCATTTGAGTTGGTGGTATGTCGTTTCATCTTACGAAGAACTCAGAACAGGGAAACAGAAGGTGAAAACCTCGGCCGAGACTTTCAGTTGTCCGTATTGCCCTGAGAGGAAACAGGATTATAAGTACAATGAACTTCTTAATCATGCCACTGGGATCGGTAGGAGTAGTTCCGATAAGAGAAGTGATAAAGAGAAAGGTTGTCATTTGGCTTTGGTAAAGTATTTGGAACAAGATCTTACGAGTAAGGACGGTGCATCGAAACCTTTAGATCAAGGATCGAACACAATAAGTCCAGGACAAACTGTAATGTCTCACTGTTCGATCAAGGATACCGATATAAGTTGGTGGTATGTAGATACAGCTTACGAAGAGCTCATAAATGGAACTCGGAATGTGAGAACCTCGGACGATACTTTCATTTGTCCGTACTGTCCTCAGAGAAAACAGGATTATGCATATAGGGAACTCCTAGAACATGCTTTTATGGTCGGTCGGAGTAGTTCCGAAAAGAGAAGTGCCAGAGAGAGGGCTAATCATCTCGCATTGTTGAAGTATTTGGAAAAGGATATTACGAGCATGCCTGGACCGTCAAAACCCGTCGATAAAACTAGTTTTTGTGTTTCAGGTACAAAATCGATAAGCCAAGGACAAACTGTCTCGCCTCAATGCTCTAACAAGGTTACTGAGTCGAGTGAATCTCAAATAAGTCGGTTGTATGTAGATAAATTTTATAAAGAACTCAAGAAGGGAAGTCTCAAAGTAAGAATCTCAGATGAGACTTTCATTTGTCCGTACTGTTCGAACATGAAAAAACCGGATTATGTGTACAGGGAACTCCTTGAACATGCTTCTGGAGTCGGTCAGAGTAGTTCGCAAAAGAGAAGTGTCAAAGAGAAGGCAACTCATCTCGCTTTAACGAAATATTTGAAAAATGATATAATCGTGAATGTGACTACTCCATCAAAACCCGTGATTGAAGGAACCGTAGTACCAAGCCGGGAAGCACGAACCGTAGTACCAAGTCGGGAAGAAAATGTGACGCCTCGCTGCTCTGACAAAGATTCTGACAAAAGTGCATCTCAGATTAATGCGTTGCAAATTAAAAAAGCATATGAACAACTAAAAAAGGGGAGTCATAATGTAAAAACCTCAGATAAAACTTTCATTTGCCCTTATTGTCCGAATAGAAAGAGAAAACGGGATTACGTGTACAGAGAAATCATTGAACATGCTTCTGGGGTGGGCTGGAGTATCTCGCAAAGTAGAAGTGGCATTGAAAAGGCGAATCATCTGGCTTTGGTCAAATTCTTGAAAAGGGATCTTATAAATGTCGGTGGATCATCAGAATCTACGGCCGAAGGTACCACGACATCGAACCGAGGAGAAACTTCAAGAGGTCATGCTTCTGAGAATGATACTAATAAAAGGGCATCTCAAATAAATGCGTTATTTGTAAATAAATCCTATGAAGAACTCAAACGGGGACGTTACAGAGTGAAAACATCAAAAGATACTTTCTCATGTCCGTATTGCCCCAAGAGAAAATGCGATTATAGGTACAGTGAACTTCTCAATCATGCTTTAGGGGTCGGTCAAAGCGACTCGCAAAAGAGAAGTGTATTGGAAAAGGCCAATCATCTAGCTTTAGTGAAATATTTGGAGAAGGATCATATGATTATGAATGTGGAACATCCAACAAAACCGGTAAATTTGGAAAAGAATTTTGTGAATATAGAACAACATCCAAAAAAACCGGCAAATGGAGGCATTCTTGTCGATTCCGAAAAGCAGTTTGTGTGGCCGTGGACTGGGATTGTGGTTAACATTCCCACGGAAATGAGAGAAGATGGGCGATGTTTTGGTGAAAGTGGTTCCAAGCTAAGGGATGAATACCGAATGAGGGGCTTTAATCCACGTAGAGTCCGGCCACTCTGGAATTTCTGGGGTCACACCGGAGCTGCAGTCGTTGAATTCAATAAAAGTTGGCTAGGGTTATATAATGCAATGGCATTTGAAAGAGCTTATGAATTAGACCATCATGGGAAAAAGGATTGGCTTTCTTATACCGAACAAAAATCTGGTCTTTATGCGTGGGTTGCCCGAGCTGATGACTATCAAATGAACAATACAATCGGGGAACAACTACGGAAGATGGATGTTAAAACAATACCTGAAATCATGGAACATGATGCTAGAATGTTCAATAAATTTGTGTCTAGTATGACTAACATTATTCATGTAAAGAAAAACAAGATCAAAGAAATGGAAGTAGTATGCGATGAAATTACACTTCGCATGGACGTTGTAATGGGCGAGATAGACAGACTCTCTCAATCTCATTGTCAAGAGATGAAGAAAATACAGTCAAGTGCATCTCAACACTTTCAGAGTATTTTGAATGGTCACGAAAGACTTAAGTTGCAACTCGAATCTCAGAAAAGAGAACTCGAGTTGCGAAGAATTGAACTGGAAAAACGCGAGGCAAATAACGAAAGTGAAAGAAAAAAGTTGGAAGAAGAGATTAATGAGACTTCAACGAAAAATCGCTTTCTTCAAATGGCTGCTCTGGAGCAACAGAAAGCCGGTGAAAATGTTTTGAAACTAGCCGCAGATCAAAAGCGGCAAAAAGAACAGCTCCATGCGAAAATCCTCCAGCTTGAAAAACAACTAAATGTGAAACAAAAACTGGAATTGGAGATTCAGCAACTAAAAGGAAAATTAAATGTCATGAAGCACATGGAAAATGATGGAGACTTTGATGTTCTGGATGTGATGGATGCTTTACACACAGATCTAAGAGAAAAGGAACAATCGCTTCGAGACATGGACGCATTGAACCAAACACTGATCGTTAAAGAGCGTAAGAGCAATGACGAACTGCAGGAAGCTCGAAAGGAATTAATTACCACCATTAAAGAGATACCGAGTCGTGCAAATATTGGCGTGAAGAGAATGGGGGAGCTTGATTATAGACCGTTTCTAGAAGCTATGAAGAAGAAATTTAATGCGGATGATGCTGAAGATAGAGCTTCGGAAATGTGTTCATTATGGGAGGAGTATCTGAAGGACCCCGACTGGCATCCATTTAAAATTTCTATAATTCAAGGGAAACATCAGGAAATTATAGACGACGAAGATGAAAAGCTGAAAGAACTGAAAAACGAGATGGGGGAAGAGGTCTACGGAGCTGTGATGACAGCATTGAAAGAGATAAATGAATATAATCCAAGTGGACGATACGTAACTTCGGAGTTATGGAATTATGCGGAGGGAAAGAAAGCAACTTTGCGAGATGGAGTACAAGTTTTATTGAAGCAATGGAAATTAAATAGACAAAAATTGGGAATGATATGA 3396 0.4022 MAHCSVKDTGITVSHLSWWYVVSSYEELRTGKQKVKTSAETFSCPYCPERKQDYKYNELLNHATGIGRSSSDKRSDKEKGCHLALVKYLEQDLTSKDGASKPLDQGSNTISPGQTVMSHCSIKDTDISWWYVDTAYEELINGTRNVRTSDDTFICPYCPQRKQDYAYRELLEHAFMVGRSSSEKRSARERANHLALLKYLEKDITSMPGPSKPVDKTSFCVSGTKSISQGQTVSPQCSNKVTESSESQISRLYVDKFYKELKKGSLKVRISDETFICPYCSNMKKPDYVYRELLEHASGVGQSSSQKRSVKEKATHLALTKYLKNDIIVNVTTPSKPVIEGTVVPSREARTVVPSREENVTPRCSDKDSDKSASQINALQIKKAYEQLKKGSHNVKTSDKTFICPYCPNRKRKRDYVYREIIEHASGVGWSISQSRSGIEKANHLALVKFLKRDLINVGGSSESTAEGTTTSNRGETSRGHASENDTNKRASQINALFVNKSYEELKRGRYRVKTSKDTFSCPYCPKRKCDYRYSELLNHALGVGQSDSQKRSVLEKANHLALVKYLEKDHMIMNVEHPTKPVNLEKNFVNIEQHPKKPANGGILVDSEKQFVWPWTGIVVNIPTEMREDGRCFGESGSKLRDEYRMRGFNPRRVRPLWNFWGHTGAAVVEFNKSWLGLYNAMAFERAYELDHHGKKDWLSYTEQKSGLYAWVARADDYQMNNTIGEQLRKMDVKTIPEIMEHDARMFNKFVSSMTNIIHVKKNKIKEMEVVCDEITLRMDVVMGEIDRLSQSHCQEMKKIQSSASQHFQSILNGHERLKLQLESQKRELELRRIELEKREANNESERKKLEEEINETSTKNRFLQMAALEQQKAGENVLKLAADQKRQKEQLHAKILQLEKQLNVKQKLELEIQQLKGKLNVMKHMENDGDFDVLDVMDALHTDLREKEQSLRDMDALNQTLIVKERKSNDELQEARKELITTIKEIPSRANIGVKRMGELDYRPFLEAMKKKFNADDAEDRASEMCSLWEEYLKDPDWHPFKISIIQGKHQEIIDDEDEKLKELKNEMGEEVYGAVMTALKEINEYNPSGRYVTSELWNYAEGKKATLRDGVQVLLKQWKLNRQKLGMI 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01933 1131 Gene3D XS domain 606 774 IPR038588 -
Vivi7g01933 1131 MobiDBLite consensus disorder prediction 461 491 - -
Vivi7g01933 1131 Coils Coil 813 868 - -
Vivi7g01933 1131 PANTHER RIBONUCLEASE P SUBUNIT P38 364 460 IPR045177 GO:0080188
Vivi7g01933 1131 Coils Coil 883 927 - -
Vivi7g01933 1131 MobiDBLite consensus disorder prediction 461 478 - -
Vivi7g01933 1131 CDD RRM_like_XS 612 719 IPR005380 GO:0031047
Vivi7g01933 1131 Coils Coil 960 980 - -
Vivi7g01933 1131 MobiDBLite consensus disorder prediction 352 372 - -
Vivi7g01933 1131 Coils Coil 1049 1069 - -
Vivi7g01933 1131 Pfam XS zinc finger domain 44 86 IPR005381 GO:0031047
Vivi7g01933 1131 Pfam XS zinc finger domain 277 319 IPR005381 GO:0031047
Vivi7g01933 1131 Pfam XS zinc finger domain 404 448 IPR005381 GO:0031047
Vivi7g01933 1131 Pfam XS zinc finger domain 155 196 IPR005381 GO:0031047
Vivi7g01933 1131 Pfam XS zinc finger domain 522 564 IPR005381 GO:0031047
Vivi7g01933 1131 Pfam XS domain 609 720 IPR005380 GO:0031047
Vivi7g01933 1131 Pfam XH domain 997 1127 IPR005379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01933 Vivi-Chr7 79370645 79376248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01933 - - gmx:100790814 1460.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01933 7 79370645 79376248 Vivi7g01933 7 79370645 79376248 ECH
Vivi3g04060 3 70719601 70724335 Vivi7g01933 7 79370645 79376248 PCT