Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04060 ATGTCTCACTCTTCTGAGGAGGATACTGATATCAGCGATTCTGAAATAGGTGAATACGAAGATAAATGTTACGAGGAACTAAAAAATGGAAGTCAGAGTGTGAAGACTTCGGACGAGAAATTCACCTGTCCATACTGTCCGAAGAAAAGAAAACGAGATTATTTATACAAGGAGCTTCTGCAACATGCTTCAGGGGTGGGTCAGAGTAGTTCATCAAAGCGAAAGCCAAGAGAAAAGGCTACTCATTTGGCTTTAGTGAAATATTTAGAAAAGGATCTTATGAATGTAGATGCTCCAACGGAACCAGTTGATGATGATAAAAGTGAAACTCGCATTGATTCTGATGAGCAGTTTGTATGGCCTTGGATGGGGATAATAGTTAACATTCCAACTAGCAAAACTGAAGACGGGCGCAAAGTCGGGGCGAGTGGTTCCAAGATTAGAGATGAGTATAGAAGTAGGGGTTTCAATCCGGTACGAGTCAATCCTTTATGGAACTACAAAGGTCACTCTGGAACTGCTCTTGTGGAGTTCAATAAAAACTGGCCTGGCTTAGATAATGCACTTGCATTTGAAAAAGCGTATGCGTTAGAACATCATGGGAAAAAGGATTGGTTTGTTAATACTGGGCCGAAGACGGGTCTTTATGGATGGGTTGCCCGAGCAGATGACTACAATGTGAATAACATCATTGGTGAACATCTGCGAAAGATGGCTGATGTTAAAACTATACCGGAGCTTATGGAAGAGGAGGCTCGGAGGCAAGATAGACTCGTCTCCAATTTGACCAACATTATTCAAGTGAAAGCCAAGCACTTATCTGAGATTGAAGCAAGATGCACCGAGACTACAGCGAAAATGAATTCTGCCATGACAGAGAAAGATTTACTCATTCAATCTTACAATGAAGAGATGAAGAAAGTACAGGCAAGTGCTAAGGATCACTTCCAAAGGATTTTTAATGATCACGAAAAGCTTAAATCGCAACTGGAATCTCAGAAAAGTGAGCTTGAATTGCGGAGAATTGCTTTGGAAAAACGTGAAGCACATAATGAAAGTGAAAGAAAAAAGTTGGCAGAGGAGATTGAGGAGAATACATCGAAAAATAGCTCTCTTCAGATGGCTTCAATAGAGCAACTGAAAGCAGATCAAAATGTTTTGAAACTGGCTGAAGATCAAAAGAAACAAAAAGAAGAACTCCATGCTAAAATCATTCAGCTTGAAAAACAACTGGATATGAAACAAAAGCTGGAATTGGAGATTCAGCAACTTAGAGGATCACTAAGTGTGTTGAAGCACATAGAAGACGATGACGATGAAGAAGTTTTGAAGAAGGTAGATGAACTGCAAAAGGGTTTAAGGGAGAAGGAACAGGCATCTGAAGACTTAGATGCATTGAACCAAACACTAATAATCAAGGAGCGTAAGAGTAACGATGAGCTGCAGGAGGCTCGAAAAGAATTGATTAATGCTATTAAAGAGATAGCAACTCGAGCTCAAATTGGTGTGAAGAGAATGGGGGAACTTGACACTGAACCATTCCTTGAAGCTATGAAGCAAAGATATAATGAGGAGGAAGCTGAAGACAAAGCTACCGAACTGTGTTCATTGTGGGAAGAGTATCTAAAAGACCCAGATTGGCATCCGTTCAAAGTTGTCTTGATTGACGGGAAAGAAAGAGAATTTATTAAAGAAGACGATGAAAAGCTGAATGGACTGAGAGAAGAAGTGGGTGAAAAGGCATATAATGCAGTGGTGGCAGCTTTAACAGAGATTAACGAATATAATCCTAGTGGGCGATATGTAACCTCTGAATTATGGAACTACAAAACTGGAAAAAGAGCAACTTTGAAGGAAGGAGTACAATTTTTGTTGAACACATGGAAACGCAAGAAAGGAATGTTGTGA 1908 0.3999 MSHSSEEDTDISDSEIGEYEDKCYEELKNGSQSVKTSDEKFTCPYCPKKRKRDYLYKELLQHASGVGQSSSSKRKPREKATHLALVKYLEKDLMNVDAPTEPVDDDKSETRIDSDEQFVWPWMGIIVNIPTSKTEDGRKVGASGSKIRDEYRSRGFNPVRVNPLWNYKGHSGTALVEFNKNWPGLDNALAFEKAYALEHHGKKDWFVNTGPKTGLYGWVARADDYNVNNIIGEHLRKMADVKTIPELMEEEARRQDRLVSNLTNIIQVKAKHLSEIEARCTETTAKMNSAMTEKDLLIQSYNEEMKKVQASAKDHFQRIFNDHEKLKSQLESQKSELELRRIALEKREAHNESERKKLAEEIEENTSKNSSLQMASIEQLKADQNVLKLAEDQKKQKEELHAKIIQLEKQLDMKQKLELEIQQLRGSLSVLKHIEDDDDEEVLKKVDELQKGLREKEQASEDLDALNQTLIIKERKSNDELQEARKELINAIKEIATRAQIGVKRMGELDTEPFLEAMKQRYNEEEAEDKATELCSLWEEYLKDPDWHPFKVVLIDGKEREFIKEDDEKLNGLREEVGEKAYNAVVAALTEINEYNPSGRYVTSELWNYKTGKRATLKEGVQFLLNTWKRKKGML 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04060 635 Gene3D XS domain 111 281 IPR038588 -
Vivi3g04060 635 Coils Coil 298 318 - -
Vivi3g04060 635 Coils Coil 380 434 - -
Vivi3g04060 635 CDD RRM_like_XS 118 225 IPR005380 GO:0031047
Vivi3g04060 635 MobiDBLite consensus disorder prediction 348 371 - -
Vivi3g04060 635 Pfam XS domain 115 226 IPR005380 GO:0031047
Vivi3g04060 635 Coils Coil 446 498 - -
Vivi3g04060 635 PANTHER RIBONUCLEASE P SUBUNIT P38 3 632 IPR045177 GO:0080188
Vivi3g04060 635 Pfam XS zinc finger domain 43 86 IPR005381 GO:0031047
Vivi3g04060 635 Coils Coil 320 364 - -
Vivi3g04060 635 Pfam XH domain 504 632 IPR005379 -
Vivi3g04060 635 MobiDBLite consensus disorder prediction 348 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04060 Vivi-Chr3 70719601 70724335 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04060 - - gmx:100812353 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04060 3 70719601 70724335 Vivi3g04060 3 70719601 70724335 ECH
Vivi3g04060 3 70719601 70724335 Vivi7g01933 7 79370645 79376248 PCT