Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi7g01903 | ATGGGAAACACCATAGGAAAAAGCAAAAAAGCAAAGATTATGAAGATAGATGGAGAAACCTTCAAAGTGAAAACTCCAACCACATCAAACGACGTCGTCAAAGACTATCCCAACCACGTCCTCCTCGACTCTCAAGCGGTAAAACACTTTGGGCTTCGGGCCAAACCCTTAGAGCCCAACCAAGAACTCAAGCCCAAGAAAATCTACTTCCTCGTGGAATTACCCAAAATAAAGCCCGAGGAAGATAAACCGTCACTCCCGAGGAGAGCGCGATCTAGTGGAATAAAGAACATGAATGCTAAGGATAGACTCGAGCTGTTAATGCTGTCAAAACGCTCCGTTTCGGATATTTCGTCGGTGAAACCGGGCTTGGGCTTAGATGGGCCCATGAGGTTGAAGATGAGGCTTCCGAAAGCCCAGCTGGAGAAGTTGATGGAAGAGAGTAATGATAAGGCTGAGGTGGCGGAGAAGATTATGAGTTTGTATATGGAAAAGAGTGGTGGTGGTGATGCGGCGGAGCATGACGGTGTTGTTTTGAATCAACATCGTAAACCACGTGGGAAACGAGTGAGTTTTAGCCCAATGGAAATTGAAGAAAGTCACGTAGAAGCAGCTTCTCAATAG | 624 | 0.4615 | MGNTIGKSKKAKIMKIDGETFKVKTPTTSNDVVKDYPNHVLLDSQAVKHFGLRAKPLEPNQELKPKKIYFLVELPKIKPEEDKPSLPRRARSSGIKNMNAKDRLELLMLSKRSVSDISSVKPGLGLDGPMRLKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMEKSGGGDAAEHDGVVLNQHRKPRGKRVSFSPMEIEESHVEAASQ | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi7g01903 | 207 | PANTHER | PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED | 1 | 194 | - | - | |
| Vivi7g01903 | 207 | MobiDBLite | consensus disorder prediction | 166 | 207 | - | - | |
| Vivi7g01903 | 207 | Pfam | PADRE domain | 1 | 194 | IPR025322 | - | |
| Vivi7g01903 | 207 | Coils | Coil | 138 | 158 | - | - | |
| Vivi7g01903 | 207 | MobiDBLite | consensus disorder prediction | 168 | 182 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi7g01903 | Vivi-Chr7 | 78895563 | 78897488 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi7g01903 | - | - | ccaj:109790903 | 294.664 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vivi7g01903 | 7 | 78895563 | 78897488 | Vivi7g01903 | 7 | 78895563 | 78897488 | ECH | |
| Vivi3g04068 | 3 | 70847665 | 70850633 | Vivi7g01903 | 7 | 78895563 | 78897488 | ECH | |
| Vivi5g03851 | 5 | 133267167 | 133269157 | Vivi7g01903 | 7 | 78895563 | 78897488 | ECH | |
| Vivi7g01903 | 7 | 78895563 | 78897488 | Vivi3g04068 | 3 | 70847665 | 70850633 | ECH | |
| Vivi3g04068 | 3 | 70847665 | 70850633 | Vivi7g01903 | 7 | 78895563 | 78897488 | PCT |