Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04068 ATGGGAAACGTTATGATTAGAAGAAGCAAAAAAGCAAAGGTGATGAAAATAAACGGAGAAACCTTCAAGCTAAAAACTCCCGCTAGAGCAAACGACGTCGTTAAGCACTACCCCGGTCACGCTCTCCTCGACTCACAAGCCGTTAAACAGTTCGGGCTTCGGGCCAAGCCGCTTGAGCCCTATCAAGAACTAAAGCCCAAGAAAATATATTTCTTAGTTGAATTACCCAAGCTTCAGCCCGAGCCGGTGCCACGTAGGGCGCGATCTACTGGTTTACGTGGCATGAATGCTATGGAGAGGCTCGATTTTTTGATGTTGTCGAAACGGAGCGTTTCGGATGTTTCTTTGGTGAAGCGGTCTAGTTTGGGTGATGGTGGACCGGGTTTGGTTCGTGATGGGTCGACTCGGGTGAAAATGAGGCTGCCGAAGGCGCAATTGGATAGGTTGATGGAGGAGAGTTGCGACGGAACGGAGGTGGCGGAGAAGATTTTGAGTTTGTACATGGGGAATAATGCCGCCGTGGAGGGTGGTGGTGAGGTAAATGAAGCCAAAATTGAGATGAATAATCAAAGGTCACGAAGGAAACGAGTGAGTTTCAGTCCGGTGGAAGAAGGTGAAATTCATGAAGAAGCAGCTGCTCAATAG 645 0.4853 MGNVMIRRSKKAKVMKINGETFKLKTPARANDVVKHYPGHALLDSQAVKQFGLRAKPLEPYQELKPKKIYFLVELPKLQPEPVPRRARSTGLRGMNAMERLDFLMLSKRSVSDVSLVKRSSLGDGGPGLVRDGSTRVKMRLPKAQLDRLMEESCDGTEVAEKILSLYMGNNAAVEGGGEVNEAKIEMNNQRSRRKRVSFSPVEEGEIHEEAAAQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04068 214 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 203 - -
Vivi3g04068 214 Pfam PADRE domain 1 201 IPR025322 -
Vivi3g04068 214 MobiDBLite consensus disorder prediction 187 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04068 Vivi-Chr3 70847665 70850633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04068 - - aprc:113849873 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04068 3 70847665 70850633 Vivi3g04068 3 70847665 70850633 ECH
Vivi3g04068 3 70847665 70850633 Vivi7g01903 7 78895563 78897488 ECH
Vivi5g03851 5 133267167 133269157 Vivi3g04068 3 70847665 70850633 ECH
Vivi7g01903 7 78895563 78897488 Vivi3g04068 3 70847665 70850633 ECH
Vivi3g04068 3 70847665 70850633 Vivi7g01903 7 78895563 78897488 PCT