Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01767 ATGTTTCATCCTATGGCTCTGTTTTCCTCTATTACACTCTGCATGGTTCTTCTCTCATCCTTCTTTTTCTTCACATGTTCCTCATCAAAACCCAATAACCACCATGCAAACGATTCTTTCTCCATCTCTTTCCCTTTAACATCTATTCCACTTTCCACAAACACAAAATTCTCCACCCTCTCATCATCTTCTTTAGCTGTGAAATCATCTTTCAAATATTCTATGGCTCTTGTCGTGACTCTCCCCATTGGAACACCACCACAGCTTCAACAAATGGTTCTCGACACAGGAAGCCAACTTTCATGGATTCAATGTCACGACAAAAAAACACCACAGAAAAAACAACCTCCGACAACATCATCGTTTAATCCTTCTCTTTCCTCTTCTTTCTATGTTCTCCCATGTAACCACCCACTTTGTAAACCCCGTGTTCCCGATTTTACCCTTCCCACAGATTGTGACGCTAATCGTTTATGCCATTACTCTTATTTCTACGCTGACGGAACTTTAGCCGAGGGTAATCTCGTCAGAGAAAAAATCAATTTCTCTCCTTCCCAAACTACCCCTCCTATTATCCTCGGTTGCGCTACTCAATCTAACGATGCTAAGGGTATTTTGGGAATGAATCTTGGTCGTCTTTCGTTCTCTTCTCAAGCTAAAATAAATAAATTTTCCTATTGTACCCCTTTAAAACAAACCCAACCCGCACCCGGTTCGTTTTACCTCGGAAATAACCCGGATTCGTCGCGGTTCCGTTACGTTAACTTGTTGACTTTTAGCCAAAGTCAACGCATGCCAAATTTGGACCCCTTGGCCTACACACTCCCTTTGCTAGGAATCAGCATTGGTGGGAAGAAATTGAACATTCCACCTTCGGTTTTCAAACCGGATGCTGGCGGGTCGGGTCAAACCATGATTGACTCCGGATCCGAATTCACTTATTTTGTGGACGAGGCTTATAATACCATACGTGAAGAGTTGGTTAAAAAAGTGGGACCCAGAATTAAGAAGGGCTACGTGTACGGTAATGTGGCTGACATTTGTTTTGATGGAGATGCGATTGAGATCGGACGGTTGGTGGGAGACATGGCGTTTGAGTTTGAGAAAGGGGTGCAAATAGTAATTCCAAAAGAAAGGGTTCTTGCTGAGGTGGAAGGTGGGGTCCATTGTTTTGCAATTGGAAGGTCAGAAAGATTGGGTGCGGGTAGTAACATTATTGGCAACATTCATCAACAAAATCTATGGGTAGAATTTGATCTCGTCAATCGTCGAGTTGGATTTGGTGAGGCCGATTGTAGCAAATCGGCTAAATAA 1314 0.4292 MFHPMALFSSITLCMVLLSSFFFFTCSSSKPNNHHANDSFSISFPLTSIPLSTNTKFSTLSSSSLAVKSSFKYSMALVVTLPIGTPPQLQQMVLDTGSQLSWIQCHDKKTPQKKQPPTTSSFNPSLSSSFYVLPCNHPLCKPRVPDFTLPTDCDANRLCHYSYFYADGTLAEGNLVREKINFSPSQTTPPIILGCATQSNDAKGILGMNLGRLSFSSQAKINKFSYCTPLKQTQPAPGSFYLGNNPDSSRFRYVNLLTFSQSQRMPNLDPLAYTLPLLGISIGGKKLNIPPSVFKPDAGGSGQTMIDSGSEFTYFVDEAYNTIREELVKKVGPRIKKGYVYGNVADICFDGDAIEIGRLVGDMAFEFEKGVQIVIPKERVLAEVEGGVHCFAIGRSERLGAGSNIIGNIHQQNLWVEFDLVNRRVGFGEADCSKSAK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01767 437 Gene3D Acid Proteases 242 437 IPR021109 -
Vivi7g01767 437 ProSiteProfiles Peptidase family A1 domain profile. 77 428 IPR033121 -
Vivi7g01767 437 PANTHER OS07G0603500 PROTEIN-RELATED 38 433 - -
Vivi7g01767 437 PRINTS Pepsin (A1) aspartic protease family signature 404 419 IPR001461 GO:0004190|GO:0006508
Vivi7g01767 437 PRINTS Pepsin (A1) aspartic protease family signature 304 315 IPR001461 GO:0004190|GO:0006508
Vivi7g01767 437 PRINTS Pepsin (A1) aspartic protease family signature 83 103 IPR001461 GO:0004190|GO:0006508
Vivi7g01767 437 FunFam Aspartyl protease family protein 57 243 - -
Vivi7g01767 437 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 92 103 IPR001969 GO:0004190|GO:0006508
Vivi7g01767 437 Pfam Xylanase inhibitor C-terminal 272 428 IPR032799 -
Vivi7g01767 437 Pfam Xylanase inhibitor N-terminal 78 243 IPR032861 -
Vivi7g01767 437 Gene3D Acid Proteases 53 241 IPR021109 -
Vivi7g01767 437 SUPERFAMILY Acid proteases 78 434 IPR021109 -
Vivi7g01767 437 CDD pepsin_A_like_plant 78 432 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01767 Vivi-Chr7 76349855 76351814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01767 79 437 Miscellaneous Gene Families AT1G77480 26.615 2.25e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01767 - - gmx:100790706 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01767 7 76349855 76351814 Vivi7g01767 7 76349855 76351814 ECH
Vivi3g04161 3 72969086 72970862 Vivi7g01767 7 76349855 76351814 PCT