Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01393 ATGGGAAGAACAATTTCAAAGACTCAAATTTACGCAATGCAGGAAAACCAACAACAACTACCTTGTATTAGCTGCACCACTTTCAACATTCTTGCTCCTATATACAAGCGTATTAACCATGAGGATGAGAGTTGTCGTGAAAGTGAGTATAGAGGATGTTGGTTGGCGAGGAATAACAGGATTTTGGATTGGTTGTTGTTTGAGAGATCTTCCATTATTTGTCTTCAGGAATTTTGGGTTGGAAATGAAGAGCTTGTTAATCTGTATGAGAAGAGACTTGGTGATGCTGGATATATTCATTTTAAGCTCGGAAGGACTAACAACCGTGGCGATGGTCTTCTGATAGCAGTGAAAAAGGAATATTTCAAAGTTATAAATTACAAGGAGTTGCATTTCAATGATTGTGGTGATCGAGTAGCTCAATTGTTACATGTTGAGTTAGCTTTTCCACTTTCACAGGGTCAAAAAAGTGGTGTTAGACAAGAAATTCTAATTGTCAATACTCACCTACTATTTCCTCATGATTCAAGTCTATGCCTTGTGCGACTTCATCAGGTTTACAAGATACTTCTATATGTGGAATCTTATCAGAAAGAGTGTCAACTTAAGCCTTTACCAATTATACTATGCGGTGATTGGAACGGAAGCAAACGCGGACATGTTTACATGTTCCTAAGGTCTCAAGGGTTTGTATCATCCTATGATACTGCACATCACTACACTGATGCAGATGCTCACAAGTGGATTAGTCATCGTAACCATCTCGGAAATACATGTGCTGTTGATTTCATATGGCTCCTGAATCCTGACAAATATCGAAAACTGCTAAAGTCAAGTTGGAGCGAAGCAGTTTTTGGCATGTTCAAGTATCTATTGCAAAGAACTTCATTGACAGAGAGTGCTGCATTTGATTTTCTAAAGGATGAAAATGAAGATTGTATTACATATTCTGGTTTTCGTAAAGCGCTTCAACAGCTTAATTTGATTGGTCATTGTTATGGTTTGAGTGATGAAGAGACAAAGGACTTGTGGTTTCAAGCAGATATAGATGGAAACGGTGTAATTGATTATAAACAATTTCTGTATCGAATATGGAATCAAACAGAGTCAGATTATCAAAGAGATGACAAATCGAACGAGACGCAAGACAAAGAATCAACTGATAGTGAAGAGGAGGAAACAATTGGCTTTAGTGTTAAAAATGCAGTGTTGTTCCCTCAAGAGATGGAGAAGGGTAGTTGGCCAGAAGACTATTCCCTTTCTGATCATGCAAGACTAACTGCAGTCTTCACACCTATAAGAATTGCATGCTCTCACAAGATTTCTTGA 1329 0.3792 MGRTISKTQIYAMQENQQQLPCISCTTFNILAPIYKRINHEDESCRESEYRGCWLARNNRILDWLLFERSSIICLQEFWVGNEELVNLYEKRLGDAGYIHFKLGRTNNRGDGLLIAVKKEYFKVINYKELHFNDCGDRVAQLLHVELAFPLSQGQKSGVRQEILIVNTHLLFPHDSSLCLVRLHQVYKILLYVESYQKECQLKPLPIILCGDWNGSKRGHVYMFLRSQGFVSSYDTAHHYTDADAHKWISHRNHLGNTCAVDFIWLLNPDKYRKLLKSSWSEAVFGMFKYLLQRTSLTESAAFDFLKDENEDCITYSGFRKALQQLNLIGHCYGLSDEETKDLWFQADIDGNGVIDYKQFLYRIWNQTESDYQRDDKSNETQDKESTDSEEEETIGFSVKNAVLFPQEMEKGSWPEDYSLSDHARLTAVFTPIRIACSHKIS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01393 442 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 11 431 - -
Vivi7g01393 442 SUPERFAMILY DNase I-like 22 238 IPR036691 -
Vivi7g01393 442 Gene3D Endonuclease/exonuclease/phosphatase 3 435 IPR036691 -
Vivi7g01393 442 MobiDBLite consensus disorder prediction 372 395 - -
Vivi7g01393 442 Pfam Endonuclease/Exonuclease/phosphatase family 27 233 IPR005135 GO:0003824
Vivi7g01393 442 SUPERFAMILY EF-hand 280 362 IPR011992 -
Vivi7g01393 442 FunFam Putative calcium-binding protein 7 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01393 Vivi-Chr7 69246922 69250308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01393 1 329 EF-hand Containing Proteins AT5G54130 72.673 5.04e-179 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01393 - - mtr:11410878 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01393 7 69246922 69250308 Vivi3g02671 3 44721315 44724342 PCT