Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01146 ATGAAAACCAAAAACAACAAGGTTGGAAATGAATTAGGTTGTGGTTTCATGAAGAGAATTTTCCATCTCAAAAGTCCTAGACTAAGAAACTCATTAGTCCATTCCCTACCATTGAAAACTAACAACAATGATCATCTCAAAAATGAACCAAACTTGTCTCCAAAGAAAGTGAAAACAATCTCCAACATCACTACACTCACTAAAAATCCGAAGCGTATTTCAGACACTACTTCAAGAAGCTCGACATCATCATCGTCTACAGGTAGTTCAACCCACAAAAGGGTTGAACAAAACTGTAATACAAACGACGATGATGTCAAGCTTCAAATAGAATCAATGCGGAATTCTCCACAACTTGCTAGAATAAGGACTACTCGCCCGCGCGACAACGAGAACAAGTCCATAACCAAAGACTTTACTCCCTTGAAACTCACCGGAAACTTGCTAGTGAACAACACTCCAAGAAGAAAAAGTGTTGAATGTTTACCTAAGCATTCAGAGTTGAACTCTGTGTCAAGTTTTTATAATAGTAACAATGCGAGAAAAATGGTTATGGGGAATATCATGAGGAAGAATAGTAATGAACTTGCACAATTTCTAAGCCAAAGACACAATACTAAAGAACCTGAATGGTTGAAATCAAAGGGGAATGAAGCTTACAAAAAGGGTGATTTTGAAGAGGCTTTGGCTTTGTATGATAAAGCAATTTCTCTTGACTCGAATAAAGCAACTTATCATTGTAACAAAAGTGCTGCTTTGATTGGATTAGGAAGGTTTCAAGAAGCGATTATTGAGTGCGAGGATTCGATTCGGTTGGATCCTTCTTATGACAGAGCTCACAACCGTTTGGCAACAATATATTTCAGATTGGGAGAAGTTGAAAAGGCACTGAATTGCAATCGATCAACCTCGTGTGTTGATTCTGTTCTTGCTTTTCAAGCTCAGGCTCTACAAAATCACATTAACAAATGCATTGAAGCTAGGAAGTTCAATGAATGGAGTGTTGTATTGAAGGAAACGCAGTCTGCATTATTCTTAGGTGCTGATTCAGCTCCACGGATTTATGCTTTACAAACTGAAGCCTTGTTGAAGCTCCTAAGATATGAAGATGCAAATGCTGTTTATGACAAAATGCCGAAATTTTCACTTGATTGGTGTAACAAGATGTTTGGCGTGGCTAATAGTTCTTACCTATTGATCGTAGGCGCACAGGTTTACTTGGCATCCGGCAGATTTGAGGATGCTGTCGCGACAGCTCAGAAAGCAGCTAGGGTTGATCCAAGCAACAGAGAAATTATTTCAGTGTTAAGGAGAGCGAGAGCAGTAGCATCGGCTAGAGTGAGTGGAAACTTACTCTTCAAGGCATCGAAATACAGCGAAGCATGTGCAGTATACAATGAAGGACTAGATCATGATCCACACAACTCAGTTCTGCTATGCAATAGAGCTGCGTGTCGTTCTAAGCAAGGACAATACGAAAACGCAATTGAAGATTGTGATTCAGCACTTATGCTTCATCCATCTTATAGCAAAGCAAAGCTAAGAAGAGCATATTGTAATGCCAAGTTGGAAAGATGGGAAGTTGCAATTCAAGACTATGAAATGCTGATAAGAGAAAAGCCAGGGGATGAAGAAGTGGCAAGGGCTTTGTTTGAGGCTAAGCTCCAAGTAAGAATACTACATGGTGAAGATGTTAAGGACTTGAAATTTGGTTCGAATTTGGTTTTCATCTCGAGTAACGATCGTTTCAGACATTACATAACCTCGCCTGGTATGGCTGTTGTGCTTTTTAGTAACAAGGGAACACACAAGCAAGTGCTGATGGTGTTAGAGCAAATCAGCAAGAGATTTCCATCTGTTAATTTTCTTAAGGTGGAGATTGAAGATCACCCCTACTTGGCGAAATCAGAAGGCGTGAGCACATTCCCGGCCTTCAAAATATACAAGAACGGATCAAGGGTTAAAGAGATTTCAGGCAACAATCACGAGTTGTTAGAAAGATCGGTTAAATTGTATAGCAGCTGA 2025 0.397 MKTKNNKVGNELGCGFMKRIFHLKSPRLRNSLVHSLPLKTNNNDHLKNEPNLSPKKVKTISNITTLTKNPKRISDTTSRSSTSSSSTGSSTHKRVEQNCNTNDDDVKLQIESMRNSPQLARIRTTRPRDNENKSITKDFTPLKLTGNLLVNNTPRRKSVECLPKHSELNSVSSFYNSNNARKMVMGNIMRKNSNELAQFLSQRHNTKEPEWLKSKGNEAYKKGDFEEALALYDKAISLDSNKATYHCNKSAALIGLGRFQEAIIECEDSIRLDPSYDRAHNRLATIYFRLGEVEKALNCNRSTSCVDSVLAFQAQALQNHINKCIEARKFNEWSVVLKETQSALFLGADSAPRIYALQTEALLKLLRYEDANAVYDKMPKFSLDWCNKMFGVANSSYLLIVGAQVYLASGRFEDAVATAQKAARVDPSNREIISVLRRARAVASARVSGNLLFKASKYSEACAVYNEGLDHDPHNSVLLCNRAACRSKQGQYENAIEDCDSALMLHPSYSKAKLRRAYCNAKLERWEVAIQDYEMLIREKPGDEEVARALFEAKLQVRILHGEDVKDLKFGSNLVFISSNDRFRHYITSPGMAVVLFSNKGTHKQVLMVLEQISKRFPSVNFLKVEIEDHPYLAKSEGVSTFPAFKIYKNGSRVKEISGNNHELLERSVKLYSS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01146 674 ProSiteProfiles TPR repeat profile. 209 242 IPR019734 GO:0005515
Vivi7g01146 674 Gene3D Glutaredoxin 568 673 - -
Vivi7g01146 674 Gene3D Tetratricopeptide repeat domain 208 559 IPR011990 GO:0005515
Vivi7g01146 674 Pfam Tetratricopeptide repeat 478 509 IPR001440 GO:0005515
Vivi7g01146 674 Pfam Thioredoxin 580 665 IPR013766 -
Vivi7g01146 674 SUPERFAMILY TPR-like 208 432 IPR011990 GO:0005515
Vivi7g01146 674 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 9 670 IPR044534 -
Vivi7g01146 674 CDD TRX_family 583 661 - -
Vivi7g01146 674 SUPERFAMILY TPR-like 448 555 IPR011990 GO:0005515
Vivi7g01146 674 Pfam TPR repeat 216 251 - -
Vivi7g01146 674 ProSiteProfiles TPR repeat profile. 396 429 IPR019734 GO:0005515
Vivi7g01146 674 SMART tpr_5 243 276 IPR019734 GO:0005515
Vivi7g01146 674 SMART tpr_5 476 509 IPR019734 GO:0005515
Vivi7g01146 674 SMART tpr_5 510 543 IPR019734 GO:0005515
Vivi7g01146 674 SMART tpr_5 396 429 IPR019734 GO:0005515
Vivi7g01146 674 SMART tpr_5 209 242 IPR019734 GO:0005515
Vivi7g01146 674 SMART tpr_5 277 309 IPR019734 GO:0005515
Vivi7g01146 674 SMART tpr_5 442 475 IPR019734 GO:0005515
Vivi7g01146 674 Pfam Tetratricopeptide repeat 403 475 - -
Vivi7g01146 674 SUPERFAMILY Thioredoxin-like 528 666 IPR036249 -
Vivi7g01146 674 MobiDBLite consensus disorder prediction 39 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01146 Vivi-Chr7 59322435 59325862 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01146 K09527 - gmx:100791862 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01146 7 59322435 59325862 Vivi3g04509 3 81721408 81725286 PCT