Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01102 ATGGAAGGAGATACTTATGTTGTTCAGGGTAAAGATCACGAAGAATTGAAACAGGCAAAAAATCAAAATATTTCTCATGGTAGCCCCAAGTATGAGAATGAACAAGATGGTATATCTTCGGACACGTCAAGTTCTCAAGATGTTGAAAATCAGGAAGGAGATAGTTTTGTTGTTCAGAATGAAGATCACGAAGAATCAAGACAGGTGAAAAGTCAAAATATTTCTCTTAATGACGCCAAGTATGAGAATAAACAAGATGACATATCTTCACACACGTCAGATTCTCAAGATGTTGAAAGTTTGGAAGTAGATAATGTTGTTCATAATGAAGATCACGAAGAATCAAAAGAGGTGATAAGTCAAAATATTTCTCTTAATGACCCCAAGTATGAGAATGAACAAGATGACAAATCTTCACACACGTCAGATTCTCAAGATGTTGAAAATTTGGAAGTAGATAATGTTGTTCAGAATGAAGATCACGAAGAATCAAAAGAGGTGATAAGTCAAAATATTTCTCACGATGGCCCCAAGTATGAGAACGAGCAAGATGATACATCATCAGACACGTCAAGTTCTAAAGATGTTGAACATTTAAAAGGAGATGCGTATATCGTTAATAATGAAGATCACAAAGAATCAAAGCAGGCGAAAAGTCAAAATTGTTCTCATGATGGCCCCAAGAATGAGAATGAACAAGATATATCATCAGACACATCAAGTTCTCAAGACGTCGAAAATCTAGGATCATCAAATACGCCATGTTCTCAAAATCAAGAAGAATCTAAACAGGTGGGAAGTCAAAATATGTCTAATGATAGTCCCAATAGTGATGTATCATCAAATACGCCATGTTCTCAAAATGCTGAAAATCTAAAAAGAGATACTTATGTTGTTCTGAATGAAGATCACGAAGAATTAAAACAGGTGAACAGTCAAAATATTTCTCATGATGGCCCCAAGCTTAAGAATGAACAAGATGGTGTATTATCAGATACATCATGTTCTCAAGATGTTGAAAAGCTTCAAGGCGATGCATTTACCTTTCAAAAAGAAGACTCCAACAAAGATTTAAAAGAGGAAAATTTTGAAAATATGGGTTATGATGTTCCCGGGTTTGAGGAAAAGCTAGATGATATATTGGATAATATATACGGGATGACAGATGTCGATTGTAATACTCCCAAGAGGGTGAAAGACAATGTGATTGGAGGATCGAACTTGTCTCATAGGGTAGATGGAAGTAGAACTATGGACTCACATTCACCAAAAATAAATCAAAAGATAGGTAACACTTCAACTGAGGTGAATACTATGAATCATAAAGTTGATACAGATCCAGGGGCTCCTCATGTGGTTGAGAAGGCTGTATCTCTTAAAAACTTTGTGAGGGAGAAAAGTTTAGTAGCGGTCTCCACTCTGCTGCGTCGACTTTCTAGAAAAACTGACGACGGTTATGTGTGTAATTCTGATAATAAAGATAAAGATGTTTCAGATATATCAAGGGACAGTGAATCCAAAGAGGCTCGTGAGAAGACAACAGAGAAAATGAATTGGAGGGATGAACCAATAACTGAAGGTCCTCTGCATCCCATAGCCATGAAAGGAAGGATTATAGTGTACACAAGACTAGCCTGCCGAGAATGTAAAGAGGTTAGGAGAATTTTGTATGTGAAAAGACTTAGATATGTTGAAATCAACATTGATGTGTACCCTAGTAGAAAGATGGAGCTGGAGAAGATTTCTGGATCTACTTCTGTTCCCAAGGTTTTTTTCAATGAAGTATGTATAGGAAGCTTGAGTGAGCTAAAGACCTTAAATGAGTCTGGCAAGCTTGATGGGAAGATTGACTTCCTTATAGCCGAATCACCTTTATTAGAGGGACCACTTCCACCACTTTCTGGAGAGGATGATGTGTCCAGTAGTGGGGCAGTTGATGAAATGGCTCTGATCGTCCGTAAAATGAAAGAATCTATTGTTGTGAGGGATCGATTTAGCAAATTGCGAAGGTTCACCAATTGCTTTATTGGCTCTGAAGCTGTAGATTTCTTATCAGAAGATCAGATTTTGGAAAGGAAAGAGGCTATTGAATTTGGACGAAAGCTCGCTAGCAAGCTCTTCTTTCAGCATGTTCTTGATGATAATCTATTTGAGGATGGTAATTACTTGTATCGGTTTTTGGATGACGATCCAATTGTGGCATCTCAGTGTCATAATATCCCAAGAGGGATAACTACCACGAAACCTAAGCCTATCACAGAAATTGCATCAAGGCTGAGATTACTGTCCTATGCAATGTTTGAAGCCTATGCCTCTGAAGATGGACGTCACATTGATTACAGAAGTATGCATGGAAGTGAGGAATTTGCAAGGTATCTAAGGATTGTAGAAGAGCTTCAAAGAGTAGAAGTGTCGGATTTGTCTAGAGAAGAGACAATTGCTTTCTTTCTTAATCTATATAATATGATGACCATCCATGCAATCTTAGTATGGGGCCATCCAGATGGAATACTAGAAAGAAGGAGATTGTTTGGAGACTTTAAATATGTTATTGGTGGGTCCACCTACTCACTTTCAGCTATTCAGAATGGCATTTTGAGGGGGAACCAGCGACAGCCATATACCCTTATGAGGCCATTTGGTGCAAAAGATAAACGTTTAATGGTGGCCCTCTCTTTACCAGAGCCTCTCATTCATTTTGCTCTAGTATGTGGTACCCGATCCGGGCCTGCACTTCGGTGCTATTCTCCTGGCGACATTGACTCAGAGTTGATGGATGCAGCTCATAATTTCCTTAGAAATGGTGGCGTTATGATAGATTTTACTGCAAAGGTTGCATATACCAGTAAAATTCTTAAATGGTTTAGCTTAGATTTTGGCAAGAATGAGGTAGAGGTTATGAAGCATGTGTCAATCTACTTAGATCCATCTGAGTCAGAGCTATTGTTTGACTTACTTGCCACTTCTGAGTTGAAGGTGATATATCAACCTTATGACTGGGGTTTGAACTGTTAG 3015 0.3821 MEGDTYVVQGKDHEELKQAKNQNISHGSPKYENEQDGISSDTSSSQDVENQEGDSFVVQNEDHEESRQVKSQNISLNDAKYENKQDDISSHTSDSQDVESLEVDNVVHNEDHEESKEVISQNISLNDPKYENEQDDKSSHTSDSQDVENLEVDNVVQNEDHEESKEVISQNISHDGPKYENEQDDTSSDTSSSKDVEHLKGDAYIVNNEDHKESKQAKSQNCSHDGPKNENEQDISSDTSSSQDVENLGSSNTPCSQNQEESKQVGSQNMSNDSPNSDVSSNTPCSQNAENLKRDTYVVLNEDHEELKQVNSQNISHDGPKLKNEQDGVLSDTSCSQDVEKLQGDAFTFQKEDSNKDLKEENFENMGYDVPGFEEKLDDILDNIYGMTDVDCNTPKRVKDNVIGGSNLSHRVDGSRTMDSHSPKINQKIGNTSTEVNTMNHKVDTDPGAPHVVEKAVSLKNFVREKSLVAVSTLLRRLSRKTDDGYVCNSDNKDKDVSDISRDSESKEAREKTTEKMNWRDEPITEGPLHPIAMKGRIIVYTRLACRECKEVRRILYVKRLRYVEINIDVYPSRKMELEKISGSTSVPKVFFNEVCIGSLSELKTLNESGKLDGKIDFLIAESPLLEGPLPPLSGEDDVSSSGAVDEMALIVRKMKESIVVRDRFSKLRRFTNCFIGSEAVDFLSEDQILERKEAIEFGRKLASKLFFQHVLDDNLFEDGNYLYRFLDDDPIVASQCHNIPRGITTTKPKPITEIASRLRLLSYAMFEAYASEDGRHIDYRSMHGSEEFARYLRIVEELQRVEVSDLSREETIAFFLNLYNMMTIHAILVWGHPDGILERRRLFGDFKYVIGGSTYSLSAIQNGILRGNQRQPYTLMRPFGAKDKRLMVALSLPEPLIHFALVCGTRSGPALRCYSPGDIDSELMDAAHNFLRNGGVMIDFTAKVAYTSKILKWFSLDFGKNEVEVMKHVSIYLDPSESELLFDLLATSELKVIYQPYDWGLNC 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01102 1004 Pfam Glutaredoxin 538 597 IPR002109 -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 309 329 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 1 20 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 129 147 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 177 232 - -
Vivi7g01102 1004 CDD DEP 651 725 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 80 118 - -
Vivi7g01102 1004 ProSiteProfiles DEP domain profile. 655 728 IPR000591 GO:0035556
Vivi7g01102 1004 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 659 726 IPR000591 GO:0035556
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 408 427 - -
Vivi7g01102 1004 SUPERFAMILY Thioredoxin-like 535 616 IPR036249 -
Vivi7g01102 1004 Gene3D Glutaredoxin 533 618 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 485 523 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 1 292 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 154 169 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 233 292 - -
Vivi7g01102 1004 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 234 1004 - -
Vivi7g01102 1004 SMART DEP_3 655 728 IPR000591 GO:0035556
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 21 55 - -
Vivi7g01102 1004 SUPERFAMILY "Winged helix" DNA-binding domain 648 736 IPR036390 -
Vivi7g01102 1004 ProSiteProfiles Glutaredoxin domain profile. 526 623 - -
Vivi7g01102 1004 MobiDBLite consensus disorder prediction 403 427 - -
Vivi7g01102 1004 Pfam Protein of unknown function, DUF547 805 932 IPR006869 -
Vivi7g01102 1004 Gene3D - 644 773 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01102 Vivi-Chr7 57298437 57307924 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01102 - - vvo:131617251 1966.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01102 7 57298437 57307924 Vivi7g01102 7 57298437 57307924 ECH
Vivi7g01102 7 57298437 57307924 Vivi3g04463 3 80329329 80333473 PCT