Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04463 ATGGAAGATCGGCATTTGTTGGAGAAAAAGGAAGCTAGTTCTGAAGCGGTTGAGAAGCTGCAAGCAGATACTTCTGCAATTCAGATTGAAGATCAGGATAAAGTGGCGAAAGCTCCGAATTCTGGTCATGATGGCTCTGAGTTAGATAATAAACAGGATGATATATCGGATGCGATCAATAATGATGGGAAAGAGTATTCTGGTGATGATAAGGTGGAGACGAATAAAGATTCCGAGGCTAAAATTGAAGAAACAAATCTAGATGATAACTCAGGAGGGAATGATTTGGCGAAAGAGAAGGATGACAATGGAGACATTGAATCCGCACATGTGAATCAGAAGGCGGATGAGATTCCAAGTGAGGACAGTGTTTTGGACCCTGTATTTGATGGAACTGAGGTTCCAGGGATGGAAGTCAACCGGAGCACATCTACTCGTAAGTTGGAAGGAGATCAGGACGGTCCAGGTGTGGTTGAGAAGGCGGTAGCTCTTAAAAATTTTGTCAGGGAGAAAAGTGCAGTGGCTGTCTCCACTATGCTGCGCCGCCTTTCTGGAAAAAGTGATGATGCTTCTGTGGGTAATTTTGATGATGAAAGCAAGGAAGTTTCAGATACCTCAGAAGTTAACGAACCTAAATTGGTTTCTCAGAAGTCGGTGGAGAAATCTGCCTGGAATCCCTTGAATTATATTAAGAAGTCATCTGATGTTGGTGTGGATTATACTGTACCGCCAATAGCCATGAAAGGAAGGATTATTCTATACACAAAACTGGGGTGCCAAGAATCTAAAATATTTAGGCTATTTTTACGTACAAAAAGGCTTAGGTTTGTGGAAATCAATATAGATGTATACCCTAGTAGAAAGACGGAGCTGGAAAAGATTTCAGGATCTACCTCAGTTCCTAAGGTGTTTTTCAATGAAATACTTATTGGAGGCTTGAGTGAGCTAAAAAACTTAGATGAATCTGGAAGGCTTGATGAGAAGATTGACTATCTTATTACTGAAGCGCCATTGTTTGAAACGCCTTCACCACCTTTTTCTGGAGAGGATGATAATTCCAGCAGCGGGGCAGTTGATGAATTGGCTCTTATTGTACGCAAAATGAAAGAATCTATTGCTGTGAAGGACAGGTTGTACAAAATGCGCAGGTTCACCAACTGTTTTTTGGGTTCAGATGCTTTATACTTCTTATCAGAAGATCAATATTTGGAAACGCCAGAGGCTGTTGAATTTGCTCGGAAGCTTGCCAGCAAACTGTTTTTTCGACATGTTCTTGACGAGAATCTGTTTGAGGATGGTAATCACGTGTATCGGTTTTTGGATGATGATCCAACTGTGGTCTCACAATGTCACAACATTCCTAGGGGCATTATTACCTTCAAACCGAAGCCTATAGCAGAAATTGCATCAAGGCTGAGAGTTCTGGCCTCTGCAATGTTTGAAGCCTATGCTTTTGAAGATGGGTCTCGTGTTGATTATACAAGTTTGCATGGAAGTGAGGAGTTCGCAAGGTATCTGAGAATAGTAGAAGAGCTCCAAAGAGTGGAAATATGGGATTTATCTAGAGAAGAGAAACTTGCTTTCTTTATTAATCTTTATAATATGATGGCCATCCATGCAATCTTAATATTGGGTCAACCAGATGGAGCACTAGAAAGAAGGAAAATATTTGGAGAGTTCAAATATGTTATAGGTGGCTCCACCTACTCACTTTCAGCTATTCAAAATGGCATATTGAGGGGAAACCTGCGGCCTCCATATAACCTTAAGAAGCCATTCGGTGCAAAAGACAATCGCTCAAAGGTAGCACTCCCTTACCCTGAGCCTCTGATTCATTTTGCTTTGGTATGTGGCACCCGATCTGGGCCTGCACTTCGGTGCTATTCTCCTGGAAAAATTGACGAAGAATTATTGGATGCAGCTCGCAACTTCATGAGAAGTGTAGGTCTTCTAATTGATTTGACTGCAAAAACTGCATATGCTAGTAAGATCCTTAAATGGTATAGTATAGATTTTGGCAAGAACGAGGTTGAGGTGATCAAGCATGTGTCGAACTATTTAGATCCAGCTGACTCAGAAGTGTTATTGGACTTGCTTGCTTCTTCTGAGTTGAAGGTGACATATCAACCTTATGACTGGGGTTTGAACTGCTAG 2154 0.4136 MEDRHLLEKKEASSEAVEKLQADTSAIQIEDQDKVAKAPNSGHDGSELDNKQDDISDAINNDGKEYSGDDKVETNKDSEAKIEETNLDDNSGGNDLAKEKDDNGDIESAHVNQKADEIPSEDSVLDPVFDGTEVPGMEVNRSTSTRKLEGDQDGPGVVEKAVALKNFVREKSAVAVSTMLRRLSGKSDDASVGNFDDESKEVSDTSEVNEPKLVSQKSVEKSAWNPLNYIKKSSDVGVDYTVPPIAMKGRIILYTKLGCQESKIFRLFLRTKRLRFVEINIDVYPSRKTELEKISGSTSVPKVFFNEILIGGLSELKNLDESGRLDEKIDYLITEAPLFETPSPPFSGEDDNSSSGAVDELALIVRKMKESIAVKDRLYKMRRFTNCFLGSDALYFLSEDQYLETPEAVEFARKLASKLFFRHVLDENLFEDGNHVYRFLDDDPTVVSQCHNIPRGIITFKPKPIAEIASRLRVLASAMFEAYAFEDGSRVDYTSLHGSEEFARYLRIVEELQRVEIWDLSREEKLAFFINLYNMMAIHAILILGQPDGALERRKIFGEFKYVIGGSTYSLSAIQNGILRGNLRPPYNLKKPFGAKDNRSKVALPYPEPLIHFALVCGTRSGPALRCYSPGKIDEELLDAARNFMRSVGLLIDLTAKTAYASKILKWYSIDFGKNEVEVIKHVSNYLDPADSEVLLDLLASSELKVTYQPYDWGLNC 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04463 717 MobiDBLite consensus disorder prediction 1 17 - -
Vivi3g04463 717 MobiDBLite consensus disorder prediction 186 212 - -
Vivi3g04463 717 Pfam Glutaredoxin 251 307 IPR002109 -
Vivi3g04463 717 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 372 439 IPR000591 GO:0035556
Vivi3g04463 717 Gene3D - 353 442 IPR036388 -
Vivi3g04463 717 ProSiteProfiles DEP domain profile. 368 441 IPR000591 GO:0035556
Vivi3g04463 717 Pfam Protein of unknown function, DUF547 519 644 IPR006869 -
Vivi3g04463 717 SUPERFAMILY "Winged helix" DNA-binding domain 360 445 IPR036390 -
Vivi3g04463 717 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 8 717 - -
Vivi3g04463 717 SMART DEP_3 368 441 IPR000591 GO:0035556
Vivi3g04463 717 MobiDBLite consensus disorder prediction 36 121 - -
Vivi3g04463 717 Gene3D Glutaredoxin 246 331 - -
Vivi3g04463 717 MobiDBLite consensus disorder prediction 1 153 - -
Vivi3g04463 717 MobiDBLite consensus disorder prediction 191 207 - -
Vivi3g04463 717 ProSiteProfiles Glutaredoxin domain profile. 239 336 - -
Vivi3g04463 717 CDD DEP 360 438 - -
Vivi3g04463 717 SUPERFAMILY Thioredoxin-like 247 330 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04463 Vivi-Chr3 80329329 80333473 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04463 - - tpra:123896937 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04463 3 80329329 80333473 Vivi3g04463 3 80329329 80333473 ECH
Vivi7g01102 7 57298437 57307924 Vivi3g04463 3 80329329 80333473 PCT