Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05561 ATGGATTCGGAATCTTCTGATGGTTCTTTAAATACCAAAACATGCAAATGCCGGTATTGTAATTGCGAATGTGGTTGCTCGGAGATTTCGACGAATTGGATTCGTAAGGTGAAACGGAAACATGACGAGATGGAGAAGGCGAGGAAGTTGAATAATGGTGGTGGTGGTGGAGATGGTGTTGTTCGCGTTGAAATTGAGGATGAATGTGTTGCGTTACGAGAAGCTGTTAGTAGTCAGCAGAAAGCGATTCAGGATTTGTATTCTGAATTGGAGGAGGAGAGGAATGCTGCTTCGTCTGCAGCGAATGAGACGATGTCGATGATATTGAGGTTGCAGACGGAGAAGGCGGAGCTTGAGATGGAAGCGCGGCAGTTTAAGCGATTTGTTGAGGAGAGGACGAGTCATGATCAGCAGGAGCTTTTAGCTTTGGAGGATTTGTTGTATAAAAGAGAGCAGGCGATTCATTCGCTTACTTGCGAAGTTCAGGCTTATAAGCACAGGTTGATGAGTTATGGGTTGACTGAGTCGGAGGTGGATGGTGATTGTGAGTTTCCGCCTTATGAGTATCCTCCTTTGAAATGTAATGTGGTGTATGCTGGTGGGGATGTTGATAATGATGATGTTTTTGATGTTGATGTTGAGAAGTATGCGTTTGGGGAAACTCCGAGGGATCGTTTGAGGAGCCTGGAGAATAGGATATCTCAAATGGAGAAAACTCCGACTTATAGTCAAATGGACGGGGATTTCAATACGAAGAATGTTATAGAGAAGGTGATTGTTGGACAATCTCCTAGAAGGAATAAACATTCGAGGAAATTTTCATGTGACTCGTCTTCTTTTGCCCCTGAGTTTGTTTCGGATTCTCCGAGGATCACTGGTAGCTTTAGGAAAATGGATTATAATGCGTCAGAGGATTTTTCCAATACGAAGAAGATGGATAATGTATCTGAGGCTGGTGATAATATGACTGATAGAGTTTACACTGTTGACTCTGAATTCAAAGGGGGAGTTGGTGGTTATGATGAGTATTCATCAACTCCAAGGGAGTTTGGAAATCAGGGTGATTTTGAAGATCCTTATGTAAAGAAGCTTTACACGAGGCTTCAAGCACTTGAGGCAGATAGGGAATCAATGAGACAAGCAATTATTTCAATGCGTACCGATAAAGCACAACTTGTTTTGCTCAAGGAAATAGCTCAACATCTGTGCAAAGAGATGTCGGACCAGAGGAGAGTAACTGTGAAAACCTTTGTTGGCGGCTTCTCATTCTTCACAATTTTTAAGTGGGTGGCTTCAATTGTTTTATGGAGAAAGAGAGGTCATCAAATCAAGTATATGTTTGGGCTACCATCTAGCGACGCCGGCTTGCTAATGCTCCTTGACAAAGGACCCCAGCTAAGGTCGTGGAGATATGTTTCAAGAGCACAGACAGAAGAATAG 1440 0.4299 MDSESSDGSLNTKTCKCRYCNCECGCSEISTNWIRKVKRKHDEMEKARKLNNGGGGGDGVVRVEIEDECVALREAVSSQQKAIQDLYSELEEERNAASSAANETMSMILRLQTEKAELEMEARQFKRFVEERTSHDQQELLALEDLLYKREQAIHSLTCEVQAYKHRLMSYGLTESEVDGDCEFPPYEYPPLKCNVVYAGGDVDNDDVFDVDVEKYAFGETPRDRLRSLENRISQMEKTPTYSQMDGDFNTKNVIEKVIVGQSPRRNKHSRKFSCDSSSFAPEFVSDSPRITGSFRKMDYNASEDFSNTKKMDNVSEAGDNMTDRVYTVDSEFKGGVGGYDEYSSTPREFGNQGDFEDPYVKKLYTRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQHLCKEMSDQRRVTVKTFVGGFSFFTIFKWVASIVLWRKRGHQIKYMFGLPSSDAGLLMLLDKGPQLRSWRYVSRAQTEE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05561 479 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
Vivi6g05561 479 Coils Coil 361 388 - -
Vivi6g05561 479 Coils Coil 73 121 - -
Vivi6g05561 479 Pfam Zein-binding 71 161 IPR007656 -
Vivi6g05561 479 PANTHER BNAANNG28530D PROTEIN 64 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05561 Vivi-Chr6 161350017 161352990 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05561 - - aprc:113861614 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05561 6 161350017 161352990 Vivi6g05561 6 161350017 161352990 ECH
Vivi6g05561 6 161350017 161352990 Vivi1g07355 1 185328829 185332802 PCT