Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07355 ATGGATTCGGATGGGGTTCCGTCGTCTAGGGATTTGTTGAAATGTTGCGATTGTGCGTGTAGTTGTTGTTCTATGGGGGGTCAGTATTCGGGGACTTGGATACGTTCGGTTAAACGGAAGCATGATGAGTTTAAGATGGATTGTCAGTTAATGGTGCCGTCGGTTGCGCGGGTTGAGATTGGGAATGAATGTATAGCTTTGCGTGAGATGGTTAGCGTGCAGCAGAAAACTATTCAAGAGATGAATGAGGAGTTGGAGGAGGAGAGGAATTCTTCGTCCACGGCTGCGAATGAGGCGATGTCGATGATCTTGAGGTTGCAGAGGGAAAAGGCGGAGATTCAAATGGAAGCTCGGCAGTTCAAGCGTTTTGCGGAGGAGAAAATGACGCATGATCAGGAGGAACTTATGTCGTTGGAGGATTTGTTGTATAAGAGAGAGCAGATAATTCAGTCGCTTACGTGTGAGGTTCAGGCTTACAAGCATAGGATGATGAGTTTCGGGTACTCTGAGGATGAGGTTGAGAATGATCAATATGATGACATTCCTCCCTATGAATACCCTCCTTTAAAATGTAATGTCATGCATAATGCCATGGATGGTGATAATGACGATACTGATGTTGAGAAATATGTATTCGGTGATACTCCTAATGACCGTTTGAGGAACTTGGAGAATAGAATTTCTAAAATGGAGAAAATTCCCACTCACAGCCAGGCGGATGGGGATTTTACGGGAAAAAATGTTCTAGAGAAAGTAGTTGTTGGACCAGCTCCAAGTTTGACGAGAAGGCATTCAAGGAAAGTTTCCTCTGAAGTAGGTCTTGAGTTCCCTACGGAGTCTCCGAAGAACAATAACAACTCTAAGAAAGATTATTTCTTTCAGCCAGAAGACCATTCCAATTTGAAGAAGGTAGATAATGCTTCAGAAGGTGATGATACGAGTGACCGAATTTATACAATTGACTCTGTTCATTCTGGGGCACAAAATAATGGCTTTACAGGTTCCAAAGCTGAAGCTTTCGAAGATTACACAACCACTCCAAAGGAATCAGGCATTCATCATGATGCTGATTTTGAGGATCCCTATATAAGGAAGCTTTACCTGAGGCTTCAGGCGCTTGAGGCTGACAGGGAATCAATGAGGCAGGCAATCATTTCAATGAGCACAGATAAAGCACAGGTTGTGTTACTGAAGGAAATAGCTCAGCATTTGTGCAAAGAGATGACACCTCAAAGAAAAAGGAATACGAGCAAACCACATATAACTGCAAGATATCCATTAATGTCAATTTTTAAGTGGATCACATCAATTGTTTTTTGGAGAAAGAAAGCTCATGAAAGCAAGTATATGTTCGGGCTACCGGCCGACAGTATGGGCTTGCTGCTGCTCCTTGACAAAAGAACACATGCAAGGCCATGGAGATGTATTTCAAGTACACAAGTGGGAGATTAG 1452 0.4298 MDSDGVPSSRDLLKCCDCACSCCSMGGQYSGTWIRSVKRKHDEFKMDCQLMVPSVARVEIGNECIALREMVSVQQKTIQEMNEELEEERNSSSTAANEAMSMILRLQREKAEIQMEARQFKRFAEEKMTHDQEELMSLEDLLYKREQIIQSLTCEVQAYKHRMMSFGYSEDEVENDQYDDIPPYEYPPLKCNVMHNAMDGDNDDTDVEKYVFGDTPNDRLRNLENRISKMEKIPTHSQADGDFTGKNVLEKVVVGPAPSLTRRHSRKVSSEVGLEFPTESPKNNNNSKKDYFFQPEDHSNLKKVDNASEGDDTSDRIYTIDSVHSGAQNNGFTGSKAEAFEDYTTTPKESGIHHDADFEDPYIRKLYLRLQALEADRESMRQAIISMSTDKAQVVLLKEIAQHLCKEMTPQRKRNTSKPHITARYPLMSIFKWITSIVFWRKKAHESKYMFGLPADSMGLLLLLDKRTHARPWRCISSTQVGD 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07355 483 Coils Coil 363 383 - -
Vivi1g07355 483 MobiDBLite consensus disorder prediction 291 313 - -
Vivi1g07355 483 MobiDBLite consensus disorder prediction 276 290 - -
Vivi1g07355 483 ProSiteProfiles GTD-binding domain profile. 62 160 IPR007656 -
Vivi1g07355 483 MobiDBLite consensus disorder prediction 258 313 - -
Vivi1g07355 483 Pfam Zein-binding 66 156 IPR007656 -
Vivi1g07355 483 PANTHER BNAANNG28530D PROTEIN 61 414 - -
Vivi1g07355 483 Coils Coil 68 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07355 Vivi-Chr1 185328829 185332802 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07355 - - gmx:100814833 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07355 1 185328829 185332802 Vivi1g07355 1 185328829 185332802 ECH
Vivi6g05561 6 161350017 161352990 Vivi1g07355 1 185328829 185332802 PCT