Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05527 ATGGAGTACGAACAGTCTTGTGTTAAGAAATATGAGAAATTTACATGGAAGGTTGAAAACTTCTCTAGCTTGAAAACCAATAAAGTTTACTCTGAGCCTTTTGTCTTAGGCGGCTATCCATGGAGGATTCGTATGTTTCCAAAGGGGAACAATATGTTAACAAAGGGGAACCGTAAAGCCAATTACTTATCCATTTATTTGGAGGCTATGAAAACTGCTAATATGTCTGAGGGATGGAACAGAGATGTCCAATTCAAGTTTCTTCTATTCAATCAACTGGATGCAAAGATGACCATCACAAAAGAAACTAGCCATAAATTCAATGCAGGTGAGGATGACTGGGGATATACACATTTCATGACACTTGCTGAGCTTCATGATCCTAAAAAAGGGTTTATCTTGAAGGATGCTTGTATTTTTGGTGTTGAAGTACTTGTTTCAAAGTCAACACATGAGAAACCAGTAAACTTAGGTGGATCTCTAAAATTTGGAAGTCAAAGTGGTGTCATTGAAGACCAAAGTCCAGAGTCAGAAATGTCAAATCAGGAAACTCTTTCAACAGTTTCTAATTTAGTTTTCAATGAAACTTCTAAAAAATCTGATGCAGAGTCGGGGTATGCTGCAATGGGGAAAGTTCTTTATTTCCTTAACACTAGAAAAGTGAAAGACCTGAACGAACAATCATGTAAGGAACTTCAAGTTCTATGGGACGACCTTGCCAAATATAAATTTGATATTACTTGGCTAGAGCCACAAGTTCAATCTGCTTTAAGAAGTAGAAGTTATGTGGAGAAATCTCTGGAGGTAGAAAAACTGAAAGGGAATGTTGCTGATCTAGAGCTGGAAACAGAGAGGCTAAAGGCAAAATTGGCTGCTGCCGAAGTAAATCTTGAGATAGAAAGGGATTTGTTGAAAGCTGAAGGTATCAAAGAAAGAGATTTGGATTCTGAATTGGGTTCAGGGAGTTGGAAGTCATAG 978 0.3773 MEYEQSCVKKYEKFTWKVENFSSLKTNKVYSEPFVLGGYPWRIRMFPKGNNMLTKGNRKANYLSIYLEAMKTANMSEGWNRDVQFKFLLFNQLDAKMTITKETSHKFNAGEDDWGYTHFMTLAELHDPKKGFILKDACIFGVEVLVSKSTHEKPVNLGGSLKFGSQSGVIEDQSPESEMSNQETLSTVSNLVFNETSKKSDAESGYAAMGKVLYFLNTRKVKDLNEQSCKELQVLWDDLAKYKFDITWLEPQVQSALRSRSYVEKSLEVEKLKGNVADLELETERLKAKLAAAEVNLEIERDLLKAEGIKERDLDSELGSGSWKS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05527 325 ProSiteProfiles MATH/TRAF domain profile. 11 144 IPR002083 GO:0005515
Vivi6g05527 325 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 300 - -
Vivi6g05527 325 SMART math_3 13 125 IPR002083 GO:0005515
Vivi6g05527 325 Coils Coil 262 303 - -
Vivi6g05527 325 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 7 157 IPR008974 GO:0005515
Vivi6g05527 325 SUPERFAMILY TRAF domain-like 13 151 - -
Vivi6g05527 325 Pfam MATH domain 18 144 IPR002083 GO:0005515
Vivi6g05527 325 CDD MATH 13 144 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05527 Vivi-Chr6 160914559 160916858 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05527 - - tpra:123889164 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05527 6 160914559 160916858 Vivi6g05527 6 160914559 160916858 ECH
Vivi6g05527 6 160914559 160916858 Vivi7g03087 7 95625302 95640355 ECH