Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05514 ATGATGAATAAATTCAAAAACTTAGTGCTTCCATTGACGAACCTTCAAATCCAACACCGTGGCATAGCAAAAGTCCGTCTAAAATGGGTGAAAAACCGAAGCATCGATCACATCATCGACAAAGAAACCGATCTCAAAGCCGCATCACTTCTCAAAGACGCAATCAAGCGTTCCTCCACCGGTTTCCTCACCGCCAAAACCTTCGCCGACTGGCAAAAGCTTCTCGGCCTAACCGTCCCCGTCCTCCGTTTCATGCGCAGGTATCCAACTCTCTTCCACGAGTTCCCTCACCCTCGCTGGAACTCTCTTCCTTGTTTCCGTTTAACCGAAACCGCTGAGCTTTTAGATTCTCAAGAACAGAAGATTTACACTCTTCACGAAAACGACACCGTTGAGAGACTCTCTAGGTTACTCATGATGACGAAAACTCGTACTGTTCCTTTACAGTCTCTTTATCCGCTTAAATTTGATTTAGGTTTACCTGATTCGTTTGAGAAAACGCTAATTCCGAAATATCCGGAAAATTTTCAGTTTGTTAAGGCGACTAATGGTGTTTCGGCTGTTCGTCTTGCGCGGTGGTGCGATGAGTTTGCGGTTTCGGCTTTGCAGAAGAGCAATGAGTGTGAGAGTGATCAGTATAGGGAGTTTAAGAGAGGGAAAACGGCGTTGGTTTTTCCGATGAGGTTTCCGAGGGGTTATGGTGGGCAGAAGAAAGTTAGGTTTTGGATGGATGAGTTTCAGAAATTGCCTTATATTTCGCCTTATGCGGATTCGTCTAAGATTGATCCTAAGAGTGATTTGATGGAGAAGCGCGTTGTTGGGGTTTTGCATGAGATTTTGAGTTTGTGTTTGCATAAGAAGACTAAGAGGAACTACTTGAGAAGTTTGAGGGAGGAGTTGAATCTTCCTCATAAGTTTACGAGGATTTTTACGAGATATCCGGGGATATTTTATCTTTCGTTGAAGTGTAAAACAACCACTGTTACCCTTAGAGAAGGGTATGCGAGGGGAAAATTGGTGGATCCGCATCCACTTGCTCGACATAGAGATAAGTTTTACCATGTGATGAGGACGGGGCTTCTTTATCGTGGTGATGGATCCTTGAAAGCTGGAGAAGATGCTTTGATGGTTGATTCTATGGAGAATGGTGAAATGGAAGATGGGGATTCTGAGGAGGAAGAGGTTGAAACAAGCGATGAATTCTGCGAGGATGAAGTTTCAGACTCGGATGATAGTAGTAGTGAGTGA 1248 0.4415 MMNKFKNLVLPLTNLQIQHRGIAKVRLKWVKNRSIDHIIDKETDLKAASLLKDAIKRSSTGFLTAKTFADWQKLLGLTVPVLRFMRRYPTLFHEFPHPRWNSLPCFRLTETAELLDSQEQKIYTLHENDTVERLSRLLMMTKTRTVPLQSLYPLKFDLGLPDSFEKTLIPKYPENFQFVKATNGVSAVRLARWCDEFAVSALQKSNECESDQYREFKRGKTALVFPMRFPRGYGGQKKVRFWMDEFQKLPYISPYADSSKIDPKSDLMEKRVVGVLHEILSLCLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYARGKLVDPHPLARHRDKFYHVMRTGLLYRGDGSLKAGEDALMVDSMENGEMEDGDSEEEEVETSDEFCEDEVSDSDDSSSE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05514 415 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 20 393 IPR045040 GO:0003723
Vivi6g05514 415 MobiDBLite consensus disorder prediction 379 415 - -
Vivi6g05514 415 MobiDBLite consensus disorder prediction 376 415 - -
Vivi6g05514 415 Pfam Plant organelle RNA recognition domain 30 359 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05514 Vivi-Chr6 160793842 160797646 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05514 - - qsa:O6P43_009443 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05514 6 160793842 160797646 Vivi6g05514 6 160793842 160797646 ECH
Vivi6g05514 6 160793842 160797646 Vivi1g06373 1 143960184 143961891 PCT