Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06373 ATGTTCTCCAAAACCAAAATCAACACTTTCTTCCACCACTACCTCAACATTCACACTCACACAAGATCAATATCCAGTCTCAAAGTAGTATGGCGCAAAGACCCATCCCTAGACCAAGCCATAGAACACGATAAACGCTACAAACAATGCGCACGCGTCGTCAAAGAAGTCCTCAACGAACCAGGCCAAGTAATCCCTCTCCGCTACCTCGAAAAGCGCCGCCAAAGAATGAGACTCAAGGTAAAAATCGACACTTTCTTGAATCAAAACCCTTATTTATTCGATGTCTACTACGACCGCATTAAACCAAAAACCGAGCCTGTGAAATTCATTCGGGTCAGCGACCGGCTTCGTAGGTTTATCGAGGAAGAGAAACGGATTTTTAAGGAGAATGAACCGTTGATTGTTGCTAAGTTGTGTAAATTGTTGATGATGTCGAAGAATAAGGTTGTTAGTGCTGATAAATTGCTTCATGTGAAGAGGGAATTCGGTTTCCCTAATGATTTTTTGGTTGATTTGGTTCCGAGGTATCCGGAGTATTTTAGGTTAACTGGATTGCCTGGGGAGGGAAAGTCGTTTCTCGAATTGGTTGATTGGAATCCGGAGTTTGCGAAGTCGGTTATTGAGAAAAGGGCTGATGAGGAAAGTAGGGCTACTGGGATTAGGGTTAGGCCTAATTTCAATGTGAAGCTTCCGCCGGGGTTTGTGTTGAAGAAGGAGATGAGGGAGTGGATTAGGGATTGGATGGAGCTTGATTATGTTTCGCCGTATGAGGATGTTTCGGATTTGGAGCAAAATTCTAGAGAGATGGAGAAGAGGGCGGTTGGGGTTTTTCATGAATTGCTTTCTCTTTCGTTGTATAAGAGGATTCCGGTGCCGATTCTTGGGAAGTTTTGTGAGGAATATAGGTTTTCGAATGCGTTTTCTAGTGCTTTTACGAGGCATTCGGGTATTTTTTATATGTCGTTGAAAGGTGGGATTGAGACTGCGATGTTGAGAGAAGCGTATGAAGGGGATAAGTTGATTGATATTGATCCGTTGCTTCAGATAAAAGATAGATTTGCTGAGGTGTTGGAGGAGGGTTGGCGGGAAAGAGTGGAGCAGTTGAGGTTGAAACAAGAGAAAATTAAGCAGGATATGGAACTTGTGGCCACAAGAGTTTCTGAATAA 1170 0.4325 MFSKTKINTFFHHYLNIHTHTRSISSLKVVWRKDPSLDQAIEHDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRQRMRLKVKIDTFLNQNPYLFDVYYDRIKPKTEPVKFIRVSDRLRRFIEEEKRIFKENEPLIVAKLCKLLMMSKNKVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGLPGEGKSFLELVDWNPEFAKSVIEKRADEESRATGIRVRPNFNVKLPPGFVLKKEMREWIRDWMELDYVSPYEDVSDLEQNSREMEKRAVGVFHELLSLSLYKRIPVPILGKFCEEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDIDPLLQIKDRFAEVLEEGWRERVEQLRLKQEKIKQDMELVATRVSE 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06373 389 Pfam Plant organelle RNA recognition domain 33 362 IPR021099 GO:0003723
Vivi1g06373 389 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 22 375 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06373 Vivi-Chr1 143960184 143961891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06373 - - gmx:100778092 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06373 1 143960184 143961891 Vivi1g06373 1 143960184 143961891 ECH
Vivi6g05514 6 160793842 160797646 Vivi1g06373 1 143960184 143961891 PCT