Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04839 ATGTCGTTGGTAACCGAAGAAATCAAGTCGAAATCAGAGGTATTCCATGGCGACCAAATCTGTCAACAAATATGCAAAGACTTTCTTGTAGAATTTGCTCTCCCCAATGGCCTGTTACCATTGAAAGACATCACTGAAGTTGGTCGCCACAGAGAAACGGGTTTCGTTTGGGTGAAACAGAAGAAAAGCATAACACACAGATTTGAAAAGATTGGGAAAGTTACATCTTATGCTACTGAGGTTACTGCTCGTGTTGTAAAAGGTAGGATTAAGAAAATGACCGGTGTGAAAACCAAAGAGCTTTTCATTTGGATTACACTTAGTGATGTTTATATTGATGATCCGCCAACTGGTAAAATCACTTTCCAAACTCCTGCTGGACTTTCTAGAACCTTCCCAGTTTCTGCTTTTGAAGTTGATGAGAAACCAAGTGGTGTTAAACAGGTTTAG 450 0.3978 MSLVTEEIKSKSEVFHGDQICQQICKDFLVEFALPNGLLPLKDITEVGRHRETGFVWVKQKKSITHRFEKIGKVTSYATEVTARVVKGRIKKMTGVKTKELFIWITLSDVYIDDPPTGKITFQTPAGLSRTFPVSAFEVDEKPSGVKQV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04839 149 Gene3D - 5 149 IPR036758 -
Vivi6g04839 149 SUPERFAMILY At5g01610-like 3 146 IPR036758 -
Vivi6g04839 149 PANTHER T31J12.3 PROTEIN-RELATED 24 140 IPR007493 -
Vivi6g04839 149 Pfam Protein of unknown function, DUF538 27 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04839 Vivi-Chr6 152246271 152246960 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04839 - - psat:127132467 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04839 6 152246271 152246960 Vivi6g04839 6 152246271 152246960 ECH
Vivi6g04839 6 152246271 152246960 Vivi1g05530 1 121475842 121476589 PCT