Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04836 ATGACCGCTATCAACCTTATTTGTAACTGTACCATGAAACCTTCCTCTAGATTTCTCGTAATTGGTAGAAAGAAATCATCATTTCTCTCAAGATGTCACCACCATTCTCTTGCAATGTCTAATAAACCTCTTGTTCTCAATCTCAATCACAAAACCACGCACTACCCTTCTTGCATATTTGAATTTGGACGCCTAATGAACGGTTTTCAACAAGTTTTACGGTTACCCTCTTGGAATTTATGTCATTCAAGAACATGTATCAGAATAAGAGCAACCAAGACAGAAAGAGTTTCTTGCATTGATGGAGTGTCCTTCAAGGCACGTGAATTCTCGAACTCAGTCGAGGCCAAGGGTAAAGGAGATGAAGAAGAATTGAAGGAGAAGAAGAATTGTGATGGTTTGAAGATTTGTGATGAGGAAGAAACGGATGTGGAGAAAGAGGCATGGAAATTGTTGCAAAAAGCACTTGTTACATATTGTGATACACCTGTTGGAACCGTTGCCGCTAATAATGAAGCGGATAAAGACTCGCCTTTGAATTATGATCAGGTTTTTATCAGAGATTTTGTTCCTTCTGCTCTTGCTTTCTTGCTCAAAGGAGAAAAAGAGATTGTCAAGAACTTTCTCCTTCACACCTTGCAACTTCAGAGTTGGGAGAAAACAGTGGATTGCTATAGCCCAGGACAGGGTTTGATGCCTGCAAGTTTTAAAGTCAAAACTATGGAATTCGATGACGAAAAGACAGGAGAAGTTTTAGATCCCGATTTTGGAGAATCAGCCATTGGTCGCGTTGCTCCGGTCGATTCAGGATTGTGGTGGATCATTCTACTTAGGGCTTATGGAAAACTCACTGGTGATTACACCTTGCAAGAAAAGTTAGAAGTTCAAACAGGCTTACAAATGATCCTTAACTTGTGTTTATCAGATGGATTTGACATGTTTCCTTCTCTGTTAGTAACTGATGGATCTTGCATGATAGATAGAAGGATGGGCATTCATGGCCACCCTCTTGAGATCCAAGCATTATTTTACTCGGCTCTTCGCTCGGCTCGCGAAATGGTTATCATAAACGATGAACATAGTAATCTGATCGGCGAAATCAACAATAGACTAAGCGCATTGTCTTTTCACATTAGAGAATATTACTGGTTGGATATGAGAAAGGTGAATGAAATATATAGGTATAAAACAGAAGAGTACTCTTTGGATGCAACTAACAAGTTCAACATTTATCCAGACCAAATTCCAATGTGGTTAATGGATTGGGTTCCTGAGGAAGGTGGTTATTTGATAGGAAATCTACAACCTGCTCACATGGATTTTAGGTTTTTCATGCTTGGAAATCTTTGGGCTATCGTTTCGTCTTTAGGTACACCAAAACAGAACAAATCTATTTTGAATCTTGTTGAATCAAAATGGGATGATCTTGTTGGTGAAATGCCTCTTAAGATATGTTATCCTGCCTTGGAACATGAAGAATGGCGCTTGATCACCGGCAGCGACCCTAAGAATACTCCTTGGTCATATCACAATGGCGGGTCTTGGCCTACCCTGATGTGGCAGTTTACGTTAGCATGCATCAAAATGGGAAGAACTGATCTAGCGGAGAAGGCGGTTGGATTGGCGGAGAAAAGGCTTCCGTTTGATTCTTGGCCGGAATACTATGACACGAAAACGGGAAGATTTATTGGAAAACAAGCTAGACTTTATCAAACATGGACATTAGCCGGGTTTCTTGCATCTAAGATGCTTTTGAAGCATCCTGAAGTAGCATCATTGTTATGTTGGGATGAAGATCTTGATATTCTTGAAACATGTGTTTGTGTACTTAATAAGAGTGGTAGGACAAAATGCTCTCGTGATGTTGCAAAGTCACACATTTTAGTGTGA 1890 0.4005 MTAINLICNCTMKPSSRFLVIGRKKSSFLSRCHHHSLAMSNKPLVLNLNHKTTHYPSCIFEFGRLMNGFQQVLRLPSWNLCHSRTCIRIRATKTERVSCIDGVSFKAREFSNSVEAKGKGDEEELKEKKNCDGLKICDEEETDVEKEAWKLLQKALVTYCDTPVGTVAANNEADKDSPLNYDQVFIRDFVPSALAFLLKGEKEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTMEFDDEKTGEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYTLQEKLEVQTGLQMILNLCLSDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVIINDEHSNLIGEINNRLSALSFHIREYYWLDMRKVNEIYRYKTEEYSLDATNKFNIYPDQIPMWLMDWVPEEGGYLIGNLQPAHMDFRFFMLGNLWAIVSSLGTPKQNKSILNLVESKWDDLVGEMPLKICYPALEHEEWRLITGSDPKNTPWSYHNGGSWPTLMWQFTLACIKMGRTDLAEKAVGLAEKRLPFDSWPEYYDTKTGRFIGKQARLYQTWTLAGFLASKMLLKHPEVASLLCWDEDLDILETCVCVLNKSGRTKCSRDVAKSHILV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04836 629 Pfam Alkaline and neutral invertase 148 588 IPR024746 GO:0033926
Vivi6g04836 629 FunFam probable alkaline/neutral invertase B 175 581 - -
Vivi6g04836 629 Gene3D - 179 577 IPR012341 GO:0005975
Vivi6g04836 629 SUPERFAMILY Six-hairpin glycosidases 147 580 IPR008928 GO:0005975
Vivi6g04836 629 PANTHER - 112 612 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04836 Vivi-Chr6 152215555 152218296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04836 - - gmx:100812691 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04836 6 152215555 152218296 Vivi1g05524 1 121238592 121244286 ECH
Vivi6g04836 6 152215555 152218296 Vivi6g04836 6 152215555 152218296 ECH
Vivi6g04836 6 152215555 152218296 Vivi1g05524 1 121238592 121244286 PCT