Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05524 ATGAACACAATCACCCTCCTTCGCAACCGCGCTCTAAATTTCGCGCGAAGAATCCTCATTGCTTCTAACAATTCATCGTTTTTTCTTTCTCCACTACAACCCCATACCAACGCTTTTCCACAACCACGTTTCAATGTTTACCACACCAAAAATCACCACCCTTTTCGAATACTAGGGTTTCATAATAGGGGTGTTTCAACTTCCATTGAGACACGTGGAAGTGAGAGTAATTTTGAGCGGATTTACATTCAGAGTGGTGTGAATGTGAAGCCATTCACGGTGGAAAGTGTTAGTAAGGGTGAAGAGAAGGATGTAAGAGAAGAAGAGTCTGTTGCGGAGAAAGAAGGTTGGAAGTTGTTGAAGGATGCTATTGTGACTTATTGTGGGAACCCTGTGGGGACTGTGGCTGCTAATGATCCGGGTGATAAGTCGCCGTTGAATTATGATCAGGTTTTTATTAGGGATTTTATTCCTTCTGCTCTTGCTTTCTTGCTAAAAGGAGAGGATGAGATTGTCAAGAACTTTCTTCTTCATACCTTGCAATTGCAGAGTTGGGAGAAAACTGTGGACTGCTACAGTCCAGGACAGGGCTTGATGCCTGCTAGTTTCAAAGTTAGAACGGTAGCTCTTGAAGGGGATACTCATGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTATTGCGGGCTTATGGGAAGATCACCGGTGACTATAGCTTGCAAGAAAGGGTTGATGTTCAAACAGGGTTGAAAATGATTCTTAAACTGTGTCTAACAGATGGTTTTGATATGTTTCCATCTCTGCTAGTCACTGATGGATCTTGCATGATAGACAGGCGTATGGGCATTCATGGTCACCCCCTGGAAATCCAAGCATTATTTTACTCAGCTCTTCGCTGTTCGCGTGAAATACTTGTTGTAACAGATGAAACCAGTGATCTTGTTAGAGCCATTAACAACAGACTGAGTGCACTGTCATTCCACATTCGACAATATTATTGGGTGGATATGAAAAAGATGAATGAAATATATAGGTATAAAACAGAAGAGTACTCCATGGATGCCATCAACAAATTCAACATCTATCCAGAACAAATTCCTTTCTGGGTAATGGATTGGATTCCTGAAAAAGGTGGATATCTAATTGGAAATCTGCAACCAGCTCACATGGATTTCCGGTTTTTCACACTGGGAAATCTTTGGTCTATTATTTCATCTCTGAGCACCCAAAAACAGAATGAGTCTATTTTAAATCTGATACAAGAAAAATGGGATGATCTCGTGGGCCATATGCCACTTAAAATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGGATAATTACTGGCAGTGACCCAAAGAATACCCCTTGGTCATATCATAATGGTGGATCCTGGCCTACCCTTCTGTGGCAGTTCACACTGGCATGCATCAAAATGGGTAGAATTGAATTAGCTCAGAAAGCAGCTGATTTAGCTGAGAAAAGGCTGCCAGTTGATTCTTGGCCTGAATATTACGATACTCGTTCTGGAAAGTTTATTGGAAAACAAGCTCGGATGTATCAAACATGGACCATAGCTGGGTTCCTTACATCCAAGATGCTTTTGAAGAATCCTGAAAAGGCATCCATGTTATTCTGCGAGGAAGATTATGATCTTCTTGAGTATTGTGTTTGTGGACTTAGCCAGAAGGGAAGAAAAAAATGCTCCCGAATTGCTGCCAAGTCTCAGATTCTTGTATGA 1791 0.416 MNTITLLRNRALNFARRILIASNNSSFFLSPLQPHTNAFPQPRFNVYHTKNHHPFRILGFHNRGVSTSIETRGSESNFERIYIQSGVNVKPFTVESVSKGEEKDVREEESVAEKEGWKLLKDAIVTYCGNPVGTVAANDPGDKSPLNYDQVFIRDFIPSALAFLLKGEDEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALEGDTHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERVDVQTGLKMILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREILVVTDETSDLVRAINNRLSALSFHIRQYYWVDMKKMNEIYRYKTEEYSMDAINKFNIYPEQIPFWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIISSLSTQKQNESILNLIQEKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAADLAEKRLPVDSWPEYYDTRSGKFIGKQARMYQTWTIAGFLTSKMLLKNPEKASMLFCEEDYDLLEYCVCGLSQKGRKKCSRIAAKSQILV 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05524 596 Pfam Alkaline and neutral invertase 117 555 IPR024746 GO:0033926
Vivi1g05524 596 SUPERFAMILY Six-hairpin glycosidases 124 547 IPR008928 GO:0005975
Vivi1g05524 596 Gene3D - 146 546 IPR012341 GO:0005975
Vivi1g05524 596 PANTHER - 94 580 IPR024746 GO:0033926
Vivi1g05524 596 FunFam probable alkaline/neutral invertase B 142 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05524 Vivi-Chr1 121238592 121244286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05524 - - gmx:100797025 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05524 1 121238592 121244286 Vivi1g05524 1 121238592 121244286 ECH
Vivi6g04836 6 152215555 152218296 Vivi1g05524 1 121238592 121244286 ECH
Vivi6g04836 6 152215555 152218296 Vivi1g05524 1 121238592 121244286 PCT