Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04777 ATGGCAAATCAAGCTTCATTACGCTTCTTGTTCTTCTCTTTTCTCACTCTCTTTGCAGCAAACAATGCATTATCAACACAATTTCTTCAAAAAAGCAAGATCTCAAAATCTCAGATTCAGTTTTTTGCAACTAGGAGAACTCTACAATACACAAATCCAGCATCAACTTCACCAGCAATCATCACTGTTCCTTCAACGAATCCAGGTGCTACAAATCTTGTCCCTTCCACCACACCACCAGTTTCATTAGCACCACCAACAAATCCAGCAAACTCACCAGTTCCTGTCACAAATCCCGTTACAGCTCCTATAACAGTTCCAGGAACTGGCACTGGAACTGGAACTGTTCCTGTGAGTTCTTATCCACCACCTTCACCGTTATCTGGAACTGTTCCTGGTACAAATCCTCAGATTCAGCCTCCTCCTTCAACCATGAATCCTCCTCCATCTTCATCTTCATCTTCTCAAGGAGGTGGTAGTGGTGGTGGTAGCTGGTGTGTGGCTAAACCTGGAGTTTCACAGACTACACTTCAAACTGCATTGGATTATGCTTGTGGAACTAATGGTGCTGATTGTACACAAATACAACAAGGCGGAATCTGTTATAATCCTAATTCACTTCAAAACCATGCTTCTTTTGCTTTCAATAGCTACTACGTGAAGAATCCTGCTCCTACTAGCTGTGACTTTGGAGGGGTTGCTACCATTGTTACTACCAATCCTAGTTCTGGTACTTGTGTCTTTCCATCATCTTCAGGAGGAGGAACAGGCTCATCCGGCTCTGGTTCTAACTCACCTTCAATAGGTTTTGGTGGGCCTTCAGCCTCTCCGGATACCTCTCATTCAACTGGTCTGAGGCCTTTCCTAAGCTGCATGATTCTGATGACACTACTGGCCAGCGGAAGACTCGGCATGAGTCCATAG 924 0.4448 MANQASLRFLFFSFLTLFAANNALSTQFLQKSKISKSQIQFFATRRTLQYTNPASTSPAIITVPSTNPGATNLVPSTTPPVSLAPPTNPANSPVPVTNPVTAPITVPGTGTGTGTVPVSSYPPPSPLSGTVPGTNPQIQPPPSTMNPPPSSSSSSQGGGSGGGSWCVAKPGVSQTTLQTALDYACGTNGADCTQIQQGGICYNPNSLQNHASFAFNSYYVKNPAPTSCDFGGVATIVTTNPSSGTCVFPSSSGGGTGSSGSGSNSPSIGFGGPSASPDTSHSTGLRPFLSCMILMTLLASGRLGMSP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04777 307 SMART X8_cls 164 248 IPR012946 -
Vivi6g04777 307 PANTHER BETA-1,3 GLUCANASE 63 259 IPR044788 -
Vivi6g04777 307 MobiDBLite consensus disorder prediction 119 148 - -
Vivi6g04777 307 MobiDBLite consensus disorder prediction 102 166 - -
Vivi6g04777 307 MobiDBLite consensus disorder prediction 102 118 - -
Vivi6g04777 307 Gene3D - 162 252 - -
Vivi6g04777 307 FunFam Glucan endo-1,3-beta-glucosidase 4 160 252 - -
Vivi6g04777 307 Pfam X8 domain 165 235 IPR012946 -
Vivi6g04777 307 MobiDBLite consensus disorder prediction 248 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04777 Vivi-Chr6 151137672 151139835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04777 150 294 Glycoside Hydrolase AT1G66250 38.312 1.72e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04777 - - vvo:131612770 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04777 6 151137672 151139835 Vivi6g04777 6 151137672 151139835 ECH
Vivi6g04777 6 151137672 151139835 Vivi1g05513 1 120982278 120985052 PCT