Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04676 ATGGCACCGGAAATTGTTCAAACCACTGTGAAACCAGTTACCGGTTTCACAAAACCGAAACGTGCATACGTAACGTTTCTCGCCGGTAACGGCGACTACGTGAAAGGCGTAATTGGTTTGGCAAAAGGTTTACGTAAGGTAAAAACGGCGTACCCGCTGGTCGTAGCCGTGCTTCCAGACGTACCGGAGGAGCACCGTCAGATGCTGGAATCTCAGGGATGTATCGTCCGTGAGATTCAACCTGTTTACCCACCGGAAAATCAAACTCAGTTCGCTATGGCTTATTACGTCATCAACTATTCCAAACTCCGTATATGGGAGTTTGTGGAATACAGCAAGATGATATATTTGGATGGAGACATTCAAGTATATGAAAACATAGATCATCTTTTTGATCTACCAGACGGTTATTTCTACGCTGTGATGGATTGTTTCTGTGAAAAAACTTGGAGTCATACACCACAGTACAAGATTGGGTACTGTCAGCAGTGTCCGGAGAAGGTGCAATGGCCGAAAGAAATGGGTCAACCTCCTTCACTTTACTTCAATGCTGGCATGTTTCTGTTTGAGCCAAGCATGGAAACTTATCATGGTCTTTTGAAAACTTGTGAGGCTACGGCTCCTACTCCTTTTGCGGAACAGGATTTCTTGAACATGTATTTTAAGGATATTTATAGGCCAATTCCTTTGGTTTATAATCTTGTTCTTGCTATGTTGTGGCGTCATCCTGAGAATGTTGATGTTCGGAAAGTCAAGGTTGTTCACTATTGTGCAGCGGGATCAAAGCCTTGGAGGTATACAGGGAAAGAAGAGAATATGCAGAGGGAGGATATAAAGATGTTGGTGCAGAAATGGTGGGACATATACAATGATTCTTCTCTTGACTACAAGAAGAATTTGATTGGAAATGGTGAGATTCAAAGGAATGAAGTTGGAAGAGAGCCATTTGTACAGGCTTTGTCGGAGGTTGGTCGTGTTCGATATGTGACAGCACCTTCGGCAGCTTAA 1008 0.4335 MAPEIVQTTVKPVTGFTKPKRAYVTFLAGNGDYVKGVIGLAKGLRKVKTAYPLVVAVLPDVPEEHRQMLESQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPEKVQWPKEMGQPPSLYFNAGMFLFEPSMETYHGLLKTCEATAPTPFAEQDFLNMYFKDIYRPIPLVYNLVLAMLWRHPENVDVRKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVQKWWDIYNDSSLDYKKNLIGNGEIQRNEVGREPFVQALSEVGRVRYVTAPSAA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04676 335 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 19 298 IPR029044 -
Vivi6g04676 335 SUPERFAMILY Nucleotide-diphospho-sugar transferases 23 298 IPR029044 -
Vivi6g04676 335 FunFam Hexosyltransferase 19 297 - -
Vivi6g04676 335 CDD GT8_Glycogenin 21 292 - -
Vivi6g04676 335 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 292 - -
Vivi6g04676 335 Pfam Glycosyl transferase family 8 25 267 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04676 Vivi-Chr6 149392942 149394639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04676 1 335 Glycosyltransferase AT1G56600 73.294 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04676 K18819 - gmx:100809287 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04676 6 149392942 149394639 Vivi6g04676 6 149392942 149394639 ECH
Vivi6g04676 6 149392942 149394639 Vivi1g05521 1 121159193 121160749 ECH