Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04618 ATGGCAACAATCGCTGGTCTGAGTCTCTCAAACCCTAGGCTCCTCTTCAACTCATCAGGACTCCCACAAACCATCAAGATCTCACCAGCTTCGTCTCTGTCAACACGCCAAACCTTAACCGGATCAGGACGGATGAAGCTAGTCCAACCTCTTCGTGCTGCACCAGAACAAATATCTAAGAAGGTGGAGGAGAGCATAAAGAGTGCACAAGAGACGTGTGCTGATGATCCGGTCAGTGGAGAATGCGTGGCTGCATGGGATGAGGTGGAGGAACTCAGCGCGGCGGCGAGCCATGCGAGGGATAGGAAGAAGGAGTCTGACCCGTTGGAGGAATACTGTAAGGATAATCCGGAGACTGAGGAGTGCAAGACTTATGATAACTGA 384 0.5156 MATIAGLSLSNPRLLFNSSGLPQTIKISPASSLSTRQTLTGSGRMKLVQPLRAAPEQISKKVEESIKSAQETCADDPVSGECVAAWDEVEELSAAASHARDRKKESDPLEEYCKDNPETEECKTYDN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04618 127 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 127 IPR039314 -
Vivi6g04618 127 MobiDBLite consensus disorder prediction 96 127 - -
Vivi6g04618 127 SMART CP12_2 58 127 IPR003823 -
Vivi6g04618 127 Pfam CP12 domain 58 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04618 Vivi-Chr6 148571659 148572348 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04618 - - pmum:103334012 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04618 6 148571659 148572348 Vivi1g05370 1 117561674 117562253 PCT