Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05370 ATGGCAGCAACAATGGCTGGTGTGAGTCTTTCAACTCCTAGAGTAATTTTCAACAGACCAGAGTCACTTCAAAAGTCTCAAACCATCAGGTTCGCACCCGTGTTCGCGCTCAACCAAAGGAGAACAGGCACAGTCAGTTCAGGCAGGATGGTAAGCATTCGACCAGTACAGGCATCACCGGACAGCATAACTGGAAAGGTGGAAGAGAGCATAAAGAACGCGGAGGAGGCATGTGCCGGAGACGCCACTAGTGGCGAGTGTGTGGCGGCGTGGGATGAGGTGGAGGAACTGAGCGCGGCTGCAAGCCACGCCAGGGATAAGAATAAGGGGTCGGACCCTCTTGAGGAATACTGCAAGGAAAATCCGGAGACTGATGAGTGTCGCACTTACGATAACTGA 399 0.5288 MAATMAGVSLSTPRVIFNRPESLQKSQTIRFAPVFALNQRRTGTVSSGRMVSIRPVQASPDSITGKVEESIKNAEEACAGDATSGECVAAWDEVEELSAAASHARDKNKGSDPLEEYCKENPETDECRTYDN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05370 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 132 IPR039314 -
Vivi1g05370 132 MobiDBLite consensus disorder prediction 100 132 - -
Vivi1g05370 132 Pfam CP12 domain 64 131 - -
Vivi1g05370 132 SMART CP12_2 63 132 IPR003823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05370 Vivi-Chr1 117561674 117562253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05370 - - qsa:O6P43_007248 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04618 6 148571659 148572348 Vivi1g05370 1 117561674 117562253 PCT