Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04603 ATGGATACGTATTTACAAGCTGGATTTCTTCGGATAGTTCCTTTTATCACTGCATTTACTTCACGTGCCAACAATCACGCGTCTCAATCTCACGTGCTATCCAGATTCTCCTTTGGATTTCGAAAATCTCCGAACTCTCGAGTCATCGGTGATGCGGTTATGGCGAAGAATATGGTTGTTGCAGAGACGGAAGGTGAGGGGAAGAATGCGAACTGGATTTTCAAGGTTTTTGATCTCAATTCTGTTTGGAGAGGGGGACGAGAGAGTGGCGATGATGATGATGATGATGATGATGATGATGATGAAGAGTGTGATGTTTGTAGTGTTGGTGAAGATGAAGATGAAGAAGAGGTTTGGTTTGATAGAGAGTCGTTTTCGAGAATGCTTCGTAGGGTAACCCTAGTTGAAGCGAGAATGTATGCGCACTTGTGTCACTTGGGGAATTTCGCATACTCTATTCCCAATATCAAGTCAGGGAACCTCTTGAAAAGATGTGGTCTGCGTTTTGTAACTTCGTCAATAGAAAAAAGGGAAATGGCTGCAGCAGCTGAAAAAAATCTGGCATTTGCTGCAATTCAGAAACAGACTAGTGAAAAAGACGCCGGAGAAAAAAATGAGGAAAATAATGATGAGTCGATGATAAATGCATCTGCTGTTTGTGAGATTTCAGTGGTTGAAGGTTTACCTGAAGCCAGCAGCGGGAGCGTTGGTACTGTGGACGTGATAAACACAGATGCTGGTTTGATGGCAACCACTGATTCAATGACAGCAGTTATTGTTGCAGATGAGGATGTAAAACAAGCTTTTGCCGATGATGTGAATTCAACAAGTTCTACACCATGTGAATGGTACATATGTGACGATGACCAGAGTTCTACAAGATATTTTGTCATTCAGGGTTCAGAATCATTTGAGTCATGGCAGGCAAACCTACTATTTGAACCAGTTCAATTCGAGGGGTTTGATGTCCTTGTCCATAGAGGTATATATGAGGCTGCAAAAGTGACATATCAGCAGATGTTACCTGAGGTTCATGCGCACCTAAACTCTCAAGGCTCTCGCGCAACATTCCGTTTCACTGGCCATTCTCTTGGGGGAAGCTTGGCATTACTTGTAAATCTTATGCTGTTGATAAGGAAGGAAGTTCCGATTTCTTCTTTGCTCCCCGTGGTGACGTTTGGTTCTCCATTCATCATGTGTGGAGGTGATCGTCTGCTCGAAAAGCTAGGATTTCCGCGGAGTCATGTTCAAGCAATTGCTATGAACAGAGACATTGTACCGCGGGCGTTTTCTTGCAAGTACCCTAACCATGTCACAGAGCTACTAAAGGCCGTTAATGCGAGCTTCCGTTGTCATCCTTGTCTTAATAACCAAAAGCTACTATATGCACCAATTGGTGAACTAGTGATTCTACAGCCAGACGATAATGTTTCACCGAGCCATGATCTCCTGCCGTCAGGTAGTGGTCTATATCTTTTGAGTGGCCCTCTCTCAGAATCCAATGACACGGAAAACCAGATCAGAGCAGCTCAATTATTCTTCTTGAACTCCCCGCATCCACTCGAGATATTAAGTGACCGATCCGCCTATGGTTCTGGAGGAACCATACAAAGGGATCATGACATGAGTTCATACTTAAAATCAATTAGAAACGTGATTCGTCAAGAACTTAGCCAAATCCGCACGGCAACAAGGAGAGAACTAAGACGAAAGGTGCGCTGGCCTCTCGTGACTCGACGTGTAAGCGATGCAGACATTGTTGGTGGGCGGTCTATCGCAAGGGTCCGCATAATTCAAGACCAGCCTCCTTTTTCTAGTATTTTCCAGAAACGTAGAGAGTCCTTGAAAAGGTTTAGTAGGCTTGTTGCATCTCAACATATGCAACTATTTGTAATGTTCTTGTTTCCGGCACGGTTGTTACTCTTGGAAACATGTAACTTGACTAGCTTAAGTTAA 1956 0.4371 MDTYLQAGFLRIVPFITAFTSRANNHASQSHVLSRFSFGFRKSPNSRVIGDAVMAKNMVVAETEGEGKNANWIFKVFDLNSVWRGGRESGDDDDDDDDDDDEECDVCSVGEDEDEEEVWFDRESFSRMLRRVTLVEARMYAHLCHLGNFAYSIPNIKSGNLLKRCGLRFVTSSIEKREMAAAAEKNLAFAAIQKQTSEKDAGEKNEENNDESMINASAVCEISVVEGLPEASSGSVGTVDVINTDAGLMATTDSMTAVIVADEDVKQAFADDVNSTSSTPCEWYICDDDQSSTRYFVIQGSESFESWQANLLFEPVQFEGFDVLVHRGIYEAAKVTYQQMLPEVHAHLNSQGSRATFRFTGHSLGGSLALLVNLMLLIRKEVPISSLLPVVTFGSPFIMCGGDRLLEKLGFPRSHVQAIAMNRDIVPRAFSCKYPNHVTELLKAVNASFRCHPCLNNQKLLYAPIGELVILQPDDNVSPSHDLLPSGSGLYLLSGPLSESNDTENQIRAAQLFFLNSPHPLEILSDRSAYGSGGTIQRDHDMSSYLKSIRNVIRQELSQIRTATRRELRRKVRWPLVTRRVSDADIVGGRSIARVRIIQDQPPFSSIFQKRRESLKRFSRLVASQHMQLFVMFLFPARLLLLETCNLTSLS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04603 651 MobiDBLite consensus disorder prediction 87 108 - -
Vivi6g04603 651 Gene3D alpha/beta hydrolase 249 475 IPR029058 -
Vivi6g04603 651 SUPERFAMILY alpha/beta-Hydrolases 277 461 IPR029058 -
Vivi6g04603 651 CDD Lipase_3 257 428 - -
Vivi6g04603 651 MobiDBLite consensus disorder prediction 90 108 - -
Vivi6g04603 651 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 243 640 IPR043367 GO:0008970
Vivi6g04603 651 Pfam Lipase (class 3) 296 432 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04603 Vivi-Chr6 148079179 148082448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04603 62 650 Acyl Lipid Metabolism Gene Families AT1G02660 54.808 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04603 - - psat:127132626 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04603 6 148079179 148082448 Vivi6g04603 6 148079179 148082448 ECH
Vivi6g04603 6 148079179 148082448 Vivi1g05355 1 117137374 117141246 PCT