Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04587 ATGGAAAACCATACCTACCAATCAAAGCTCAAATCTCAGTTAGAGCTCTTAATCGATTTTGAAGATGATAATAGAGACGACGATGATGATTATGGCTTGAAAACGTTTTACCCGTGCCCATTTTGCGAGGATGATTTTGATATTCTAGAGCTTTGTTGCCATATTGATTTGGAACATCCAATTGATGCTACCTCTGGGCTTTGTCCAGTTTGTGGCGTGTGGGTGGGATCAGATTTGGTTGAGCATATAACAGCTCAACATGGAAACTTGTTTAAGAGTGATTACAAATCAAAATACCATCATAAACATGATTCGTACTCAAAACTTTCCTTTTCAAGAAAGGGTGGACGGCATGGACACTTGCAATCTTCTTCAGACGGGTTGTCTTCGCCTGTGATGTCAACCTCCAAGGCGGCTTATGATCCATTTCTGTCATTTGTATGTGGCTCACCTGCTTCTGGTGAACATGGAATTGTGCAGCCTGATTCTTCAAGTGAAGCAAGCATTGAAGAAATACACTCTGATGATACATTGTTAGAAAGAGATGTTCCACCACCTTTATGTGAGAAAGACAAAGTGGAGAAAGCAAGGCGAAGTGAGTTTGTACAAGGGCTTTTGTTTTCGACTATTCTTGATCCTGACTTTTGA 648 0.4059 MENHTYQSKLKSQLELLIDFEDDNRDDDDDYGLKTFYPCPFCEDDFDILELCCHIDLEHPIDATSGLCPVCGVWVGSDLVEHITAQHGNLFKSDYKSKYHHKHDSYSKLSFSRKGGRHGHLQSSSDGLSSPVMSTSKAAYDPFLSFVCGSPASGEHGIVQPDSSSEASIEEIHSDDTLLERDVPPPLCEKDKVEKARRSEFVQGLLFSTILDPDF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04587 215 MobiDBLite consensus disorder prediction 168 185 - -
Vivi6g04587 215 Pfam Drought induced 19 protein (Di19), zinc-binding 37 88 IPR008598 -
Vivi6g04587 215 PANTHER PROTEIN DEHYDRATION-INDUCED 19 20 212 IPR033347 -
Vivi6g04587 215 MobiDBLite consensus disorder prediction 109 131 - -
Vivi6g04587 215 MobiDBLite consensus disorder prediction 156 185 - -
Vivi6g04587 215 Pfam Stress-induced protein Di19, C-terminal 109 210 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04587 Vivi-Chr6 147903455 147906346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04587 - - psat:127079806 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04587 6 147903455 147906346 Vivi1g05583 1 122649323 122652023 ECH
Vivi6g04587 6 147903455 147906346 Vivi6g04587 6 147903455 147906346 ECH
Vivi1g05583 1 122649323 122652023 Vivi6g04587 6 147903455 147906346 ECH