Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05583 ATGGACGCTGATTCCTCTTGGACTGCTCGTCTCTCTTCCGCATCCAGACGCTATCAAGCCGCTCTTCAATCTCGATCAGATATGTTCATGGGTTTTGATGAGAACGATGTGGAAGAAGATATAAGGGAAGAGTTTCTGTGTCCGTTTTGTTCGGAGTATTTTGATATTGTTGGATTGTGCTGCCATATTGATGAAGAGCATCCAATGGAAGCAAAAAATGGGGTATGTCCAGTTTGTGCATTGAGGGTGGGGGTTGATATGGTTGCTCACATAACCTTACAACATGGAAATATATTTAAGATGCAGCGCAAGAGGAAATCACGGAAAGGTGGATCTTATTCAACGCTTTCTTTATTGAGGAAGGAGCTGAGAGAAGGAAATTTGCAATCCCTTTTTGGTGGGTCTCAATGTATAGTGTCATCGTCTAATGCAGCACCTGATCCACTGCTGTCATCATTCATATCGCCTTTAAGTAATGAATCTATGAGTTCTCAGTCTCACACACATACTGAGACAAAATCATCCAAGAAAGGCTCGGATGAGACTGTACCAAAAAGCCACGTGGAGACACCAACCATGTCAGTTAAAGATAAGGAGGAGAAGATGAAAAGATGCGAGTTTATTCAAGGACTGTTGATGTCCACCATACTTGATGACGATTTATGA 666 0.4219 MDADSSWTARLSSASRRYQAALQSRSDMFMGFDENDVEEDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGVDMVAHITLQHGNIFKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSQCIVSSSNAAPDPLLSSFISPLSNESMSSQSHTHTETKSSKKGSDETVPKSHVETPTMSVKDKEEKMKRCEFIQGLLMSTILDDDL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05583 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 30 218 IPR033347 -
Vivi1g05583 221 MobiDBLite consensus disorder prediction 170 184 - -
Vivi1g05583 221 MobiDBLite consensus disorder prediction 156 198 - -
Vivi1g05583 221 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
Vivi1g05583 221 Pfam Stress-induced protein Di19, C-terminal 116 216 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05583 Vivi-Chr1 122649323 122652023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05583 - - gmx:100795155 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05583 1 122649323 122652023 Vivi1g05583 1 122649323 122652023 ECH
Vivi6g04587 6 147903455 147906346 Vivi1g05583 1 122649323 122652023 ECH
Vivi1g05583 1 122649323 122652023 Vivi6g04587 6 147903455 147906346 ECH