Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04132 ATGAGTATACTACACGATGATATTGTGATTATTACACCATCAAAAAAAGAAGGTGAAGAAGCTACCATCGTAACCGTTAACTGTCCGGACAAAACCGGTCTAGGTTCTGATTTATGTCGCATCATTCTCTTCTTTGGTCTCACCATTCTCCGAGGAGATGTTTCAACTGATGGAAAATGGTGCTATATTGTATTCTGGGTGGTGGGAAAAGAAAAAACAAGGTGGAGTTTGTTGAAGAAGAGACTAATCGCTGCTTGCCCTTCTTTTTCTTCAGCTTATGCATTCTCTTTCTATTCCACTCATTTACCGTCTCCGAAGCCTCCTGATCTTTTTCTTTTGAAATTTTGTTGCAAAGATCGGAAAGGTCTTTTACATGATGTGACAGAGGTTCTGTGTGAGCTAGAGCTCACCATACAGAAAGTGAAGGTTTCTACCACACCTGATGGAAGAGTGTTGGATCTATTTTTCATCACGGATCCAAGAGAGCTTCTGCATACAGAGAAGAGAAGGGATGATATAGTTAACAAATTAACACCTATTTTGGAGAATGTTTTCAATACAATTGACATTGAATTGGTTGATCCATCTATTTTTGAGAAGGTCTTCAATACAAATGACACTGAACCAGTTGACTCAGAAACTACTGATTTTTCTCAAGCATCTCCGCCTCTTCCAAATGTAATCACATATGTATTTGATTTGCAAAGTGGAACTTCCACATCAGATTCTGTTTCTATTGTGATGGATAATAAATTGAGTCCTGCTCACACACTTGTCCAAATTATGTGCCATGATCATAAAGGTCTTCTTTATGACATCATGAGAACTTTGAAGGAATACAATATTCAGATATCTTATGGGAGATTCTCAAAGAAAAGTAGAGGAAAATGTGAGATTGACTTGTTTATCAGGCAAGTTGATGGCAAAAAGATAGTTGATCCTAGCAAGCAAGAATCTTTATCGTCTCGTCTTAAGATTGAACTACTCTGCCCACTCAAAGTAGCGGTAGTGAGCAGGGGTCCTGATACAGAATTGCTGGTTTCAAACCCTGTCGAGTTGTCTGGCAGAGGAAGGCCGCTTGTTTTTCATGATATCACTCTTGCTCTCAAAATGCTTGGACTTTGTATCTTTGCGGCTGAAGTTGGAAGACATGTGATTGGAGAGCGCGAGTGGGAAGTTTATAGAATCTTGCTTGATGAAGTGGAGGGATTACCTTTTCCAAGAAACAAGATTGAGAAAGGAGTTTGGGAAATTTTGATGGGTTGGCAGTGA 1272 0.3931 MSILHDDIVIITPSKKEGEEATIVTVNCPDKTGLGSDLCRIILFFGLTILRGDVSTDGKWCYIVFWVVGKEKTRWSLLKKRLIAACPSFSSAYAFSFYSTHLPSPKPPDLFLLKFCCKDRKGLLHDVTEVLCELELTIQKVKVSTTPDGRVLDLFFITDPRELLHTEKRRDDIVNKLTPILENVFNTIDIELVDPSIFEKVFNTNDTEPVDSETTDFSQASPPLPNVITYVFDLQSGTSTSDSVSIVMDNKLSPAHTLVQIMCHDHKGLLYDIMRTLKEYNIQISYGRFSKKSRGKCEIDLFIRQVDGKKIVDPSKQESLSSRLKIELLCPLKVAVVSRGPDTELLVSNPVELSGRGRPLVFHDITLALKMLGLCIFAAEVGRHVIGEREWEVYRILLDEVEGLPFPRNKIEKGVWEILMGWQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04132 423 ProSiteProfiles ACT domain profile. 112 195 IPR002912 -
Vivi6g04132 423 SUPERFAMILY ACT-like 20 86 IPR045865 -
Vivi6g04132 423 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 411 IPR040217 -
Vivi6g04132 423 SUPERFAMILY ACT-like 108 181 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04132 Vivi-Chr6 140115022 140117445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04132 - - gmx:100818216 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04132 6 140115022 140117445 Vivi6g04132 6 140115022 140117445 ECH
Vivi6g04132 6 140115022 140117445 Vivi1g07027 1 168775517 168778249 PCT