Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07027 ATGGGAATACTATACGATGATGTAGTGATTATCAAGCCGCCAGAAAAAGAAGGTGACCCAACTATGGTTACTGTGAATTGCCCCGACAAAACCGGTCTTGGTTGTGACTTGTGTCGTATCATACTCTTCTTTGGTCTAAACATTGTTAGAGGAGATGTGTCAACGGATGGAAAGTGGTGCTATATAGTTTTCTGGGTGGTTGGGAAACAGAAGACAAGATGGAGTTTGTTGAAGAAGAGGATGGTTGAAGCTTGTCCTTCTTGTTCCTCAGCTTCTGGAATCTCTTATTACTGTTCGGATTTGCAGCCAACTAAGCCTCCTGATGTTTTCCTGTTGAAATTCTGCTGCCATGATCGGAAAGGACTCTTACACGATGTTACTGCGGTTCTTTGTGAACTAGAGCTTTCTATTATCAAAGTCAAGGTTTCCACTACACCCGATGGAAAAGTCTTGGATCTGTTTTTTATCATAGATACCAGAGATCTTCTACATACAAAGACAAGAAAGGATGATACAATGGAACATATAAAAGGTGTTTTGGAGGATTCTGTACTTACTATGGACATCGAATTGGTTGGTCCGGAAATTTCTGCTTGTTCGCAGGCATCTTCATTCCTTCCAGCTGCCATCACTGAAAATGATTATAGTTTGGAATTGCCTGATTCAGTTCAAACCGGAACTCTCCGATCAGATTATACTTCTATCACGGTGGACAACACGCTTAGTCCGGCTCATTCCCTTGTCCAAATTACGTGCCAAGACCACAAAGGTCTTCTTTACGACATAATGAGAACTCTCAAAGACTACAACATTAAGATTTCGTTCGGGCGTTTCACTACAAAGCCTCGACGAAAATGTGAGATGGACTTGTTCATCATGCAAGCAGATGGAAAGAAGATAGTTGACCCTAACAAGCAGAGTTCTTTGTTGTCGCGCCTTAGAACGGAACTATATCGTCCACTAAGAGTAGCTGTTGTGAGCCGAGGCCCTGATACCGAGCTTCTGGTTGCAAACCCTGTCGAGTTGTCTGGCGAAGGACGGCCTCTAGTTTTTTACGATATTACTCTCGCTCTCAAAATGCTCGAAATTTGCATCTTTTCGGCTGAGATAGCGAGACACGTGATCGGAGACCGAGAGTGGGAAGTTTATAGAATCTTGCTCGACGAAGGGGAGGGATTGTGTGTTCCGCGGAACAAGATTGAGGAGGGAGTTTGGAAGATGTTGATGGGATGGGAGTGA 1239 0.4366 MGILYDDVVIIKPPEKEGDPTMVTVNCPDKTGLGCDLCRIILFFGLNIVRGDVSTDGKWCYIVFWVVGKQKTRWSLLKKRMVEACPSCSSASGISYYCSDLQPTKPPDVFLLKFCCHDRKGLLHDVTAVLCELELSIIKVKVSTTPDGKVLDLFFIIDTRDLLHTKTRKDDTMEHIKGVLEDSVLTMDIELVGPEISACSQASSFLPAAITENDYSLELPDSVQTGTLRSDYTSITVDNTLSPAHSLVQITCQDHKGLLYDIMRTLKDYNIKISFGRFTTKPRRKCEMDLFIMQADGKKIVDPNKQSSLLSRLRTELYRPLRVAVVSRGPDTELLVANPVELSGEGRPLVFYDITLALKMLEICIFSAEIARHVIGDREWEVYRILLDEGEGLCVPRNKIEEGVWKMLMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07027 412 ProSiteProfiles ACT domain profile. 247 328 IPR002912 -
Vivi1g07027 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Vivi1g07027 412 SUPERFAMILY ACT-like 18 79 IPR045865 -
Vivi1g07027 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
Vivi1g07027 412 Pfam ACT domain 112 164 IPR002912 -
Vivi1g07027 412 SUPERFAMILY ACT-like 107 165 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07027 Vivi-Chr1 168775517 168778249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07027 - - gmx:100816138 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07027 1 168775517 168778249 Vivi1g07027 1 168775517 168778249 ECH
Vivi6g04132 6 140115022 140117445 Vivi1g07027 1 168775517 168778249 PCT