Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04059 ATGGCGAAATACGGCGAGGGCGATAAACGGTGGATCGTGGAAGAAAGACCCGACGGCACCAACGTCCACAACTGGCACTGGTCCGAAACCAACTGTCTAGAATGGTCCAGAGCCTTCTTTACCAACCTCCTCTCAAATCTCGTCATCCTCAACGGCGAAGGTAACCTCTTCATCAAAACCACCGCGCTCCGCAACCTCGACGGCGAAGCCTACATCAACATCCGTAAGGGGAAGATCATCCCCGGCTACGAGGTGAATCTCACTCTTTCATGGGAAGGTGAAGCCAAAGACTCCGAAGGTAAGTCGTTGCTGAAAGTTAACGGTACTGTTGAAATCCCTTATATCTCTGATGAGAACGCGGATGAGGATCCTGATATTAGGGTTACGGTTGAAGATGAGGGACCGATTGGGAAGAGGATTAAGGATGCGATGTTTTCGAAGAAGGGGTTGATTTTGGAGAAGGTTAGGGTTTGGGTTCAGAGTATGGCGAAAGGAGGTCCGGTTAAAGAGGAGTTGGATACTAAGAAGCCGTTGCCGCAGCCACTGAAGCAAAATCAGAATAATGCTCCGGTTGCTACGGCGACAGCTGCGAAGAGTGATTCTGTTAAAAAGGAGGGTGTAGTGGAGAAAAAGAAGGAGAGTAAGAAAGGACGGAAGAATATTGTGTTGACGGAGAAGTTTAGTTGTAGGGCGAAGGATTTGTATGAGATATTGATGGATGAGAATAGGTGGAAGGGTTTTACGCAGAGTAATGCGAGGATTAGTAAAGAGGTTGGTGGTGAGATCAGTATTTTTGATGGGTCTGTTACTGGAAGTAATTTGGAGTTGCAAGAAGCTAAGTTGATTGTGCAGAGGTGGAGATTCGGGAGCTGGGCCGATGGTGTTCAATCGCAGGTGAAACTTGTTTTTGAGGAACCTGAACCAGGGGTTACTGTTGTTAAGCTGACACATACTGATGTACCTGTGGAAGATAGGTATGGCAATGCCACTGTGGTGGAGAATACCGAAAGGGGATGGCGGGAACATATTTTCCAAAGGATACGTGCTGTTTTTGGTTTTGGAATTTGA 1068 0.4728 MAKYGEGDKRWIVEERPDGTNVHNWHWSETNCLEWSRAFFTNLLSNLVILNGEGNLFIKTTALRNLDGEAYINIRKGKIIPGYEVNLTLSWEGEAKDSEGKSLLKVNGTVEIPYISDENADEDPDIRVTVEDEGPIGKRIKDAMFSKKGLILEKVRVWVQSMAKGGPVKEELDTKKPLPQPLKQNQNNAPVATATAAKSDSVKKEGVVEKKKESKKGRKNIVLTEKFSCRAKDLYEILMDENRWKGFTQSNARISKEVGGEISIFDGSVTGSNLELQEAKLIVQRWRFGSWADGVQSQVKLVFEEPEPGVTVVKLTHTDVPVEDRYGNATVVENTERGWREHIFQRIRAVFGFGI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04059 355 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 156 IPR036338 -
Vivi6g04059 355 SUPERFAMILY Bet v1-like 220 354 - -
Vivi6g04059 355 Gene3D - 18 173 IPR036338 -
Vivi6g04059 355 CDD SRPBCC_Aha1 220 353 - -
Vivi6g04059 355 Pfam Activator of Hsp90 ATPase homolog 1-like protein 231 351 IPR013538 -
Vivi6g04059 355 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 164 IPR015310 GO:0001671|GO:0051087
Vivi6g04059 355 MobiDBLite consensus disorder prediction 168 211 - -
Vivi6g04059 355 Gene3D - 218 354 IPR023393 -
Vivi6g04059 355 Pfam Activator of Hsp90 ATPase, N-terminal 29 163 IPR015310 GO:0001671|GO:0051087
Vivi6g04059 355 MobiDBLite consensus disorder prediction 179 195 - -
Vivi6g04059 355 SMART Aha1_N_2 29 164 IPR015310 GO:0001671|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04059 Vivi-Chr6 138117877 138120124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04059 K26216 - gmx:100812897 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04059 6 138117877 138120124 Vivi6g04059 6 138117877 138120124 ECH
Vivi6g04059 6 138117877 138120124 Vivi1g07403 1 187511030 187513460 PCT