Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07403 ATGGCAAAATACGGCGAAGGCGACAAACGTTGGATCGTCGAAGACAGACCCGACGGCACAAACGTCCACAACTGGCACTGGTCCGAAACCAACTGCCTAGAATGGTCCAGAACCTTCTTCAACAAGCTCTTCAACAACCTCAAAATTCTCGACGGCGAGGGTAACTTCCACGCCGCCGTCAAGAAGGTCGAGAAGCTCGACGGCGAGGCATACGTTAACGTCCGCAAGGGGAAGATCATTCCGGGATACGAAATTAGTGTGTCGATTTCATGGGAAGGGGAGGCGAGGGATTCCGACGGGAAGATCTTGCATAAGGTTGTTGGGAGTTTTGAGATTCCGTATATTTCCGATGAGAATGCCGATGAGGATCCGGAAGTTAGGGTTAGTGTGAAAGATGAGGGGGTTATTGGGAAGAGTTTGAAGGACGCGGTTGTTGTGAAAGGGAAGGCGGTGATTTTGGAGAAGGTTAGGGTTTGGGTTGAGAGTATGTCGAAAGGTGGACCGGTTAAAGATGAGCTTGAGAGTAAGAAGGTTGCTCCTCCGCCGCAGAGGAGTAATAATTCGGTTGTTGCGGCCGGGGCGAAGAAAGAGGCGGCGGAGGTTGTTGCGGTTGCGACAAAGAATGAGAAGGAGAAGGGGAAGAAGGGTTGTAAAACAATTAGTTTGAATGAGAAGTTTAATTGTAGGGCGAAGGATTTGTTTGAGATATTGATGGATGAGAATAGATGGAAGGGTTTTACGCAGAGTAATGCGAGGATTAGTAAGGTTGTTGGTGGTGAGTTTAGTATCTTTGATGGGTCTGTGACAGGGGAGAATTTGGAATTGGAAGAAGGGAAGTTGATTGTTCAGAGATGGAGATTTGGGAGCTGGCCTGATGGGAAGCATTCAATGGTGAGACTTGTGTTTGAGGAGCCTGAATCTGGAGTTACAGTTGTAAAGCTAACACACACGGATGTGCCTGAAGAAGACAGATATGGGAATGCGACTGTGGTGGAGAATACAGAGAGAGGATGGAGGGATCTCATTTTCCAAAGGATTCGGTCCGTGTTTGCTTTTGGAATGTGA 1065 0.4808 MAKYGEGDKRWIVEDRPDGTNVHNWHWSETNCLEWSRTFFNKLFNNLKILDGEGNFHAAVKKVEKLDGEAYVNVRKGKIIPGYEISVSISWEGEARDSDGKILHKVVGSFEIPYISDENADEDPEVRVSVKDEGVIGKSLKDAVVVKGKAVILEKVRVWVESMSKGGPVKDELESKKVAPPPQRSNNSVVAAGAKKEAAEVVAVATKNEKEKGKKGCKTISLNEKFNCRAKDLFEILMDENRWKGFTQSNARISKVVGGEFSIFDGSVTGENLELEEGKLIVQRWRFGSWPDGKHSMVRLVFEEPESGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRSVFAFGM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07403 354 CDD SRPBCC_Aha1 219 352 - -
Vivi1g07403 354 Gene3D - 18 174 IPR036338 -
Vivi1g07403 354 MobiDBLite consensus disorder prediction 168 188 - -
Vivi1g07403 354 Pfam Activator of Hsp90 ATPase homolog 1-like protein 230 349 IPR013538 -
Vivi1g07403 354 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Vivi1g07403 354 Gene3D - 216 353 IPR023393 -
Vivi1g07403 354 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Vivi1g07403 354 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 164 IPR015310 GO:0001671|GO:0051087
Vivi1g07403 354 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Vivi1g07403 354 SUPERFAMILY Bet v1-like 219 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07403 Vivi-Chr1 187511030 187513460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07403 K26216 - tcc:18599135 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07403 1 187511030 187513460 Vivi1g07403 1 187511030 187513460 ECH
Vivi6g04059 6 138117877 138120124 Vivi1g07403 1 187511030 187513460 PCT