Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04030 ATGAGTTTCTTCAAATCCGTTTTCTCCGACGACCCTAACCCTTCACCTCCCGAATCCAACAATGCTCCCCACCGCGAGTCGCCAAACGCGCCGCTCAGTCCTTCCGCCGCGTGGAAGAATCTCGGCAGCCTAATCAAAACCCTCAGCGAAAAATCAGAAACCGTGATCGATATCTACCGTCGCGATCTTCATGAATTTGGCACAGGTTTGAAGAAGGAGATTGAGGTCGCTCACGGCTCTCTCGAAACGGTGGGACACGTCATCGACCGATTTGGGAACACCGTGATTAAAGGAACGGCTCAGATTATATCTCATGGCAAAGACGTGATCCTTGATTCTGATTCCGATTCGGATAACAGCAATAATAATAATAAGAATAAGAAACAGAGTGGTTCGAATTCGAAGGTGTATTGTAGATTTGATTCTCAGGTTCGTGCGATTCAGGGTGATCCTAAGACTTTCACGGAAGAACCGTTTGATTTGGAGCGGTATAATAAGTGGAAATTGGAGTTTTCGTTGGAGGGGAAGAATGAAGAAATGGAAGGGCTTCTAAAAGAGAATGAGGCTATGGAGAGTGTTTATAAGAGGGTTGTTCCTAATGTTGTTGATAGTGAAACTTTTTGGTTGAGGTATTATTATAAGCTTTATAAGGTTAAGAAAGCTGAGGATGTTAGGGCTAGGCTTGTGAGACGAATGAAGAAGGAAGAGGAAGAAGAGTTGAGCTGGGATGTTGAAGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAAGATGATGATGATGATGGTGATGACCACGAGCATGATGAAGAAGATGATGATGATGAGAAGAATGGAAGAGAGGGTGGTGAGGATTTTAAGATGAAAGATGGTGGTGTGAAAATTAAGAGATTGGATGATTCTGATGAGGAAGAGTCTAAAGTTGAAAAGAGAAATAGTTTATCAGAAAACAAGATGAAGGAGGAATCAAAAGTTGATGAGAATTTGGAGGTTGTTCAAGAGAAGAGTGATGGAGGACAAGTGGATGATGTTAAGGATTCTGTAGTTGATTCGGACAAGAGAATGACAGTGGAGAGTAATGTCGGTGATGGAAAGTCATCGCCGGTTGTAAGTAAGGACAAGGAGCGTGAGGAATTGGAGGAGAAAGATCTTGAGTGGGATGAGATTGAAGAACTTGGTAGAATTGATGACAAGAAGGCAACGGGGAGTGGTAGTCCAAGTAAAATTGATATACGGAAGCGGCTGAGTTCGGCCGCGGAAGAAGAAGACTTGAGTTGGGATATTGAAGATGATGATGATGAGCTTACCAAGGCTTGA 1341 0.4288 MSFFKSVFSDDPNPSPPESNNAPHRESPNAPLSPSAAWKNLGSLIKTLSEKSETVIDIYRRDLHEFGTGLKKEIEVAHGSLETVGHVIDRFGNTVIKGTAQIISHGKDVILDSDSDSDNSNNNNKNKKQSGSNSKVYCRFDSQVRAIQGDPKTFTEEPFDLERYNKWKLEFSLEGKNEEMEGLLKENEAMESVYKRVVPNVVDSETFWLRYYYKLYKVKKAEDVRARLVRRMKKEEEEELSWDVEDDDDDDDDDDDDDDDDDDDEDDDDDGDDHEHDEEDDDDEKNGREGGEDFKMKDGGVKIKRLDDSDEEESKVEKRNSLSENKMKEESKVDENLEVVQEKSDGGQVDDVKDSVVDSDKRMTVESNVGDGKSSPVVSKDKEREELEEKDLEWDEIEELGRIDDKKATGSGSPSKIDIRKRLSSAAEEEDLSWDIEDDDDELTKA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04030 446 MobiDBLite consensus disorder prediction 1 15 - -
Vivi6g04030 446 MobiDBLite consensus disorder prediction 288 367 - -
Vivi6g04030 446 Coils Coil 218 238 - -
Vivi6g04030 446 MobiDBLite consensus disorder prediction 236 446 - -
Vivi6g04030 446 SMART wurzfinal6 167 219 IPR005607 -
Vivi6g04030 446 SUPERFAMILY BSD domain-like 137 224 IPR035925 -
Vivi6g04030 446 Gene3D BSD domain 128 229 IPR035925 -
Vivi6g04030 446 MobiDBLite consensus disorder prediction 115 133 - -
Vivi6g04030 446 MobiDBLite consensus disorder prediction 396 411 - -
Vivi6g04030 446 MobiDBLite consensus disorder prediction 239 287 - -
Vivi6g04030 446 PANTHER SYNAPSE-ASSOCIATED PROTEIN 11 395 - -
Vivi6g04030 446 MobiDBLite consensus disorder prediction 113 133 - -
Vivi6g04030 446 Coils Coil 173 193 - -
Vivi6g04030 446 Coils Coil 380 400 - -
Vivi6g04030 446 ProSiteProfiles BSD domain profile. 167 219 IPR005607 -
Vivi6g04030 446 MobiDBLite consensus disorder prediction 1 35 - -
Vivi6g04030 446 Pfam BSD domain 167 223 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04030 Vivi-Chr6 137649888 137653687 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04030 - - mtr:25499068 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04030 6 137649888 137653687 Vivi6g04030 6 137649888 137653687 ECH
Vivi6g04030 6 137649888 137653687 Vivi1g05181 1 112559002 112560794 PCT