Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05181 ATGAATTTCTTCAAATCCGTTTTCTCTGACGATCCAGATCCTCCTCAGTCCGAACCCAACAATGCAAACCCCAATTCCGATCCCGATTCCGGTTCCGGCGCCGGCGACGCTTGGAACTTCGGTGGACTCATCAAAACCCTCACAACCAAATCCGAATCCATAATCGAGACTTACCGTCGCGATCTACAAGAATTCAGCACCGGCTTGAAGAGCGAGATCGAAGTTGCACATGATTCGGTTGGCGAGATCGGTAGCACCGTCATTAAATCAACGGCTCAGATCATATCTCAAGGTAAGGAAGCCATCCTCGCCGTTAACCTCGATTCAGATTCCGATAATGGCACCGCCACAGCGAGTCGCGATTCGAGCCGATTGGATACGAAGCGATATAGTAGGTTTGATGCTCAGGTTGGTGCTATGCAAGGGGACGTTAGCACTTACACTGAGGTTCCTGAGGATTTGAATGAATTCAATGAGTGGAAATTAGGGTTTGAATTGGATGGGAAAAGTGATGAAATGGAGAGTCTTTTTAGGGAGAATGATGCAATGGAGAGTGTTTATAAGAAGGTTGTTCCAAATGATATTGATCATGAAACTTTCTGGTATAGGTATTATTATAAGGTTTATAGACTCAAGAAAGCTGAAGATGTTAGGGCTAGGCTTGTTAGGAGAATATCCAAGGAAGAAGAGTTTTTGAGTTGGGATGTTGAAGATGATGATGAAGAGGAGGAGGAGGAGGAGGAGGAGAATGAAGGTAAAGTTAAACCCGAGAATGTGATCAATAAGGAAATTGGTGGTGAAAATTTGGTGAAAAGTGTAGATGCTGATTTGAAAATTGCTGCCTTTGGCTCGGGTGCTGGTTCTAGTGATGAGAAGAGATTGAGTGTGGAAGAGGTGCAGCATTCAGGGTCTAAAGTAGAAAAGATAGACAATTCAATGCAAAGCAATGAACATGGTAATGAGACGGGTAAGTCTGTTGAAGAATCACCTGTTGTTGAAAAAGCTGAAGTTGTTCGTGAGATGGGTGGTGGAAGTGAAGAAAAGAATGTGGATGGTGATGTTGATAAAGCATCGAAGTTGGAAGTGGGCGATGCTGCTAACAAGAATAGTTTTACGGCTGCGTCCAATGAGAAAGTGATACTTGATGAGAAAGTGGTAATGCTGGAAACGAAGTCTTCTGATGTAAAATCTCTAGGTAAGAATAAAGAGTCATCATCAGTGGTTGAAAGTCAGCCCATGGAAAATGAGGAGGAAGAGGATCTTGGGTGGGATGATATAGAGGATCTTAGCAGTATTGATGATAAGAAAGGAGCTCAATCTGAGAGTCAGAGTGGTAGCACCAGCAAGGTTGATTTGCTGAAGTGCGTTAGTACTGCAGAGGAAGATGAAGACTTGAGTTGGGACATTGAAGAAGACGATGAGCCTGTTAAGCCTTGA 1437 0.4363 MNFFKSVFSDDPDPPQSEPNNANPNSDPDSGSGAGDAWNFGGLIKTLTTKSESIIETYRRDLQEFSTGLKSEIEVAHDSVGEIGSTVIKSTAQIISQGKEAILAVNLDSDSDNGTATASRDSSRLDTKRYSRFDAQVGAMQGDVSTYTEVPEDLNEFNEWKLGFELDGKSDEMESLFRENDAMESVYKKVVPNDIDHETFWYRYYYKVYRLKKAEDVRARLVRRISKEEEFLSWDVEDDDEEEEEEEEENEGKVKPENVINKEIGGENLVKSVDADLKIAAFGSGAGSSDEKRLSVEEVQHSGSKVEKIDNSMQSNEHGNETGKSVEESPVVEKAEVVREMGGGSEEKNVDGDVDKASKLEVGDAANKNSFTAASNEKVILDEKVVMLETKSSDVKSLGKNKESSSVVESQPMENEEEEDLGWDDIEDLSSIDDKKGAQSESQSGSTSKVDLLKCVSTAEEDEDLSWDIEEDDEPVKP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05181 478 MobiDBLite consensus disorder prediction 1 37 - -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 283 376 - -
Vivi1g05181 478 PANTHER SYNAPSE-ASSOCIATED PROTEIN 12 468 - -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 13 32 - -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 436 453 - -
Vivi1g05181 478 Pfam BSD domain 160 216 IPR005607 -
Vivi1g05181 478 SMART wurzfinal6 160 212 IPR005607 -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 235 260 - -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 391 455 - -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 321 362 - -
Vivi1g05181 478 ProSiteProfiles BSD domain profile. 160 212 IPR005607 -
Vivi1g05181 478 Gene3D BSD domain 121 223 IPR035925 -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 306 320 - -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 412 427 - -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 235 251 - -
Vivi1g05181 478 SUPERFAMILY BSD domain-like 130 217 IPR035925 -
Vivi1g05181 478 MobiDBLite consensus disorder prediction 291 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05181 Vivi-Chr1 112559002 112560794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05181 - - gmx:100792113 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05181 1 112559002 112560794 Vivi1g05181 1 112559002 112560794 ECH
Vivi6g04030 6 137649888 137653687 Vivi1g05181 1 112559002 112560794 PCT