Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04010 ATGGGTGCTTCCCAATCGCTCTCTCAAAAATCCATCTTTGAATTCACAGTCAAGGATGCTAAGGGAAGGGACGTGGACCTCAGCATATACAAAGGGAAAGTTCTTCTTATAGTTAACGTTGCTTCAAAATGTGGATTTACGAATTCCAATTATACCCAGTTAACTGAGCTTCACAGCAGATACAAAGATAAAGGACTTGAGATATTGGCTTTTCCATGTAATCAGTTTTTGAACCAAGAGCCTGGGAGTAGCCTGGATGCAGAACAATTCGCCTGTACAAGATTCAAAGCCCAGTATCCGATTTTTGGAAAGGTACGCGTGAATGGACCCGACACAGCACCTCTCTACAGATTCCTTAAAGAAAAGAAATGTGGTTTTCTAGGGTCTAGGATAAAATGGAATTTCACAAAGTTTTTGGTTAACAAAGAAGGGCTTGTGATCCAGCGTTATGGTCCAACCACCAAACCATTCTCATTTGAAAATGAGATCAAGAAGGCATTGGGGGAAGCTTGA 513 0.4133 MGASQSLSQKSIFEFTVKDAKGRDVDLSIYKGKVLLIVNVASKCGFTNSNYTQLTELHSRYKDKGLEILAFPCNQFLNQEPGSSLDAEQFACTRFKAQYPIFGKVRVNGPDTAPLYRFLKEKKCGFLGSRIKWNFTKFLVNKEGLVIQRYGPTTKPFSFENEIKKALGEA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04010 170 FunFam Glutathione peroxidase 3 169 - -
Vivi6g04010 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Vivi6g04010 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Vivi6g04010 170 SUPERFAMILY Thioredoxin-like 11 168 IPR036249 -
Vivi6g04010 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Vivi6g04010 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Vivi6g04010 170 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Vivi6g04010 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Vivi6g04010 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Vivi6g04010 170 PANTHER GLUTATHIONE PEROXIDASE 6 167 IPR000889 GO:0004602|GO:0006979
Vivi6g04010 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Vivi6g04010 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Vivi6g04010 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Vivi6g04010 170 Gene3D Glutaredoxin 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04010 Vivi-Chr6 137214684 137216799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04010 - K00432 mtr:25499098 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04010 6 137214684 137216799 Vivi6g04010 6 137214684 137216799 ECH
Vivi6g04010 6 137214684 137216799 Vivi1g06367 1 143814062 143815519 PCT