Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06367 ATGGGTGCTTCGCAATCAGTTTCAGAAAATTCTATTCATGAATTCAAAGTCAAGGATGCTAGAGGCAAAGAAGTGAACCTTGGAAGCTATAGGGGGAAGGTTCTTTTAGTAATTAATGTTGCATCAAAATGTAACTTTGCTGAAGCGAATTACACTCAGTTAACTCAGCTTTACTCGAGATATAAGGACTCGGGTCTTGAGATATTGGCATTTCCATGTAACCAATTTTTGAGGAAAGAGCCAGGAACTAGTCAGGAGGCAGAAGATTTTGCATGTAACACATATAAAGCTGAGTATCCCATTCTTGGAAAGATACGCGTGAATGGACAAGATGCAGCACCTGTGTATAAATACTTGAAAGCACAAAAATGTGGAAGTTTGGGATCAAGAAGGATAAAGTGGAATTTCACAAAGTTCTTAGTTGATGAGAAAGGCCATGTGATCCAGCGTTATAGTCCAACAACCCAACCATTGGCCATAGAGAATGATATCAAGAAGGCATTGAATGTGGTTTGA 516 0.3915 MGASQSVSENSIHEFKVKDARGKEVNLGSYRGKVLLVINVASKCNFAEANYTQLTQLYSRYKDSGLEILAFPCNQFLRKEPGTSQEAEDFACNTYKAEYPILGKIRVNGQDAAPVYKYLKAQKCGSLGSRRIKWNFTKFLVDEKGHVIQRYSPTTQPLAIENDIKKALNVV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06367 171 ProSiteProfiles Glutathione peroxidase profile. 2 171 IPR000889 GO:0004602|GO:0006979
Vivi1g06367 171 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Vivi1g06367 171 PANTHER GLUTATHIONE PEROXIDASE 6 168 IPR000889 GO:0004602|GO:0006979
Vivi1g06367 171 Gene3D Glutaredoxin 2 171 - -
Vivi1g06367 171 FunFam Glutathione peroxidase 3 170 - -
Vivi1g06367 171 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Vivi1g06367 171 SUPERFAMILY Thioredoxin-like 11 169 IPR036249 -
Vivi1g06367 171 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Vivi1g06367 171 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Vivi1g06367 171 PRINTS Glutathione peroxidase family signature 132 141 IPR000889 GO:0004602|GO:0006979
Vivi1g06367 171 CDD GSH_Peroxidase 11 164 IPR000889 GO:0004602|GO:0006979
Vivi1g06367 171 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06367 Vivi-Chr1 143814062 143815519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06367 - K00432 gmx:100527283 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06367 1 143814062 143815519 Vivi1g06367 1 143814062 143815519 ECH
Vivi6g04010 6 137214684 137216799 Vivi1g06367 1 143814062 143815519 PCT