Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03981 ATGGAGCTTAGTAAAGTGACATTAGAGATATTCACAAAACTTGAACAACAATGGCTTTCAGTTTCACAATGTGGAGCCACTTCCAAAACCCGCATACTAAGCATAGACGGCGGAGGAACCACCGCCATTGTCTCCGGTGCAGCCTTAATCCATCTCGAGGACCAGATCCGTTCACAAACCAAAGATCCTCACGCTCAAATCACTGATTACTTTGACATTATCACCGGAACTGGCATTGGCGCCATACTCGCTGCTATGATCACTGCTGATGACGGCTTTGGTAGGCCTCTCTATACTGCTAGAGAGGCTGTTACTTTCATCGCCGATAAGAATGATGAACTATACAAACCGAAGTCTGTAGGCGTTTTCCGCCGGAGACGAGGATTCTCTTCGAGAAGTATGGAGAGATTGTTGAAGAAAGTGTTTCAAAGCAAAGAAAGTGAAGGAAAATCGTTGACGTTAAAGGACACATGTAAGCCTTTGCTTATCCCTTGCTTTGATCTCAAGACTTCAGCACCGTTCGTTTTCTCACGAGCGGACGCGTCCGAGTCACCGAGTTTCAACTTCGAGCTTTGGAAGGTCTGTCGCGCCACGTCGTCGACTCCAGGTCTCTTCAAACCCTCCCAATTCGCTTCTGTAGACGGTAAAACCTCTTGCTCAGCCGTGGACGGTGGTCTTGTGATGAACAATCCGGCGGCAGCGGCTGTCACACATGTTCTCCACAACAAGCGTGATTTCCCGTCGGTGAATAGCGTGGAGGATCTGATGGTTCTGTCAATCGGAAACGGAGCGCCGGCGAATAGAGTGCGTGATGTCCGTGAGTGCTCGACGTCGACGGTGGTTGACATTGCTCTCGACGGCGTTTCGGAAACCATTGATCAGATGATGGGAAACGCCTTCAGTTGGAACCGTACTGACTACGCCAGAATTCAGGCGTATAATTTAGGAGAAAAGGGAATGGATGTGTTGAAGGAGAGAGTGTTGGAGTCGTTGCCGTTTGGTGGGAAGCGGTTACTAGAAGAAACAAACGGTAACAGAATTGAGAGATTTGTGCAACGTCTTGTTGCTACTGGAAAGTCTAGTTTACCACCTAGTCCCTGTAAGGTTACGCCGTTAGTTTCTTGCTAA 1128 0.484 MELSKVTLEIFTKLEQQWLSVSQCGATSKTRILSIDGGGTTAIVSGAALIHLEDQIRSQTKDPHAQITDYFDIITGTGIGAILAAMITADDGFGRPLYTAREAVTFIADKNDELYKPKSVGVFRRRRGFSSRSMERLLKKVFQSKESEGKSLTLKDTCKPLLIPCFDLKTSAPFVFSRADASESPSFNFELWKVCRATSSTPGLFKPSQFASVDGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNSVEDLMVLSIGNGAPANRVRDVRECSTSTVVDIALDGVSETIDQMMGNAFSWNRTDYARIQAYNLGEKGMDVLKERVLESLPFGGKRLLEETNGNRIERFVQRLVATGKSSLPPSPCKVTPLVSC 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03981 375 Pfam Patatin-like phospholipase 33 235 IPR002641 GO:0006629
Vivi6g03981 375 SUPERFAMILY FabD/lysophospholipase-like 29 342 IPR016035 -
Vivi6g03981 375 CDD Pat17_PNPLA8_PNPLA9_like 32 331 - -
Vivi6g03981 375 Gene3D Cytosolic phospholipase A2 catalytic domain 22 362 - -
Vivi6g03981 375 PANTHER PATATIN-LIKE PROTEIN 6 1 368 - -
Vivi6g03981 375 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 33 236 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03981 Vivi-Chr6 136765339 136767459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03981 1 372 Acyl Lipid Metabolism Gene Families AT3G63200 67.801 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03981 - - gmx:100806989 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03981 6 136765339 136767459 Vivi6g03981 6 136765339 136767459 ECH
Vivi6g03981 6 136765339 136767459 Vivi1g06412 1 144782301 144784138 PCT