Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03964 ATGGAGACACTTGTTGTTGTAGCTCAGCATAGGAACCAATACTATGGTGGATCTAAATCGCCACGATTTGGTTCTTCTTCGCCTTCGAGTCACTTTAGGGGTATTAATTGTAGAACATTTCAAACTGGGTCTGGTATTCTACCAACACCGTTTAACTCTACTACTTCGGCTTCGCCGGATAATAAACTGAAAACACCTTTAAGTACTCCGGTTTCGAAGTCTGATGGTAAAAGTTTGTTCAAAGATGCACCTAGTAGTGCCCCGGTTCCTATCAGAGACAATGGTTGTAGAAAGGATGTAGCTTTTGTTGATGCTAATGGTAGTTTTTTGCTTTCAGAACTTTGGGCTGGACCTACTTATTCAAATTCTCCACCGCCTAGTTCTTTGCCGATTCCGAAATTCTCTGTTAGGCCTAAGAGGACTGTGTCTCTTGAGCTTCCTGTTTCTGCTTTACCTGAGATTGAAATGCGTCAGTTTGCTTACTCTGCTCCGTGTTCCCCTCGTCAGGAGGATTCCCCTTTCGCAAAAGATTTCTTTGTTAATGATGATTCTGCGACTAAGACACTCTGTCGCATTCTCAATCTTAACTTGGATGATGATGAATGA 606 0.4241 METLVVVAQHRNQYYGGSKSPRFGSSSPSSHFRGINCRTFQTGSGILPTPFNSTTSASPDNKLKTPLSTPVSKSDGKSLFKDAPSSAPVPIRDNGCRKDVAFVDANGSFLLSELWAGPTYSNSPPPSSLPIPKFSVRPKRTVSLELPVSALPEIEMRQFAYSAPCSPRQEDSPFAKDFFVNDDSATKTLCRILNLNLDDDE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03964 201 Pfam Proline-rich nuclear receptor coactivator motif 115 134 - -
Vivi6g03964 201 MobiDBLite consensus disorder prediction 46 86 - -
Vivi6g03964 201 MobiDBLite consensus disorder prediction 46 75 - -
Vivi6g03964 201 PANTHER BNAA03G57290D PROTEIN 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03964 Vivi-Chr6 136474307 136476890 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03964 - - adu:107493014 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03964 6 136474307 136476890 Vivi6g03964 6 136474307 136476890 ECH
Vivi6g03964 6 136474307 136476890 Vivi1g06438 1 145432139 145434180 PCT