Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06438 ATGGAGACACTTGTTGTTGTTGAGCAACATAAGAATCAATACTGTAGCAGTTCTAAGCCACAACAAGACCATGGTAGATTTGAGTATTCAACTTCCAAAGACTTTATAGGGATTAATTGCAGGACTTTTGAGTCTGGTTTAGCTTTATCACCTACTACACCATTGAAATCTTTTGATGAAAGTCCTAATTTGAAAACTACTCCTAAGACTAAGATAAGTGATCCAATTCCAATTAATGGCAAAGGTTTTAGAAATGAAAGAATTTTTGATGAAAGTGATGGAGGCATTTTGCTATCTGAGTTATGGGCTGGACCTACATACTCGAATTCGCCACCGCCTAGTTCGTTGCCGATTCCTAAGTTTTCTGTGAGGCCTAAAAGGACTGTGTCTCTTGATCTTCCTGGTTCGTCTCGTGAGATTGAACTGGGTTTCATGGCTAAGTCTGCGCCGTGTTCTCCGACTAGGGAGCGTTTGGATTTTACTAGGGATCTTTTTGTTAATGCTGATTCTGCTACTAAGACGTTGTGTCGGATTCTCAATCTTAATGTCAGCGATGAGTGA 561 0.4011 METLVVVEQHKNQYCSSSKPQQDHGRFEYSTSKDFIGINCRTFESGLALSPTTPLKSFDESPNLKTTPKTKISDPIPINGKGFRNERIFDESDGGILLSELWAGPTYSNSPPPSSLPIPKFSVRPKRTVSLDLPGSSREIELGFMAKSAPCSPTRERLDFTRDLFVNADSATKTLCRILNLNVSDE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06438 186 MobiDBLite consensus disorder prediction 54 77 - -
Vivi1g06438 186 MobiDBLite consensus disorder prediction 54 73 - -
Vivi1g06438 186 Pfam Proline-rich nuclear receptor coactivator motif 102 121 - -
Vivi1g06438 186 PANTHER BNAA03G57290D PROTEIN 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06438 Vivi-Chr1 145432139 145434180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06438 - - gmx:100791409 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06438 1 145432139 145434180 Vivi1g06438 1 145432139 145434180 ECH
Vivi6g03964 6 136474307 136476890 Vivi1g06438 1 145432139 145434180 PCT