Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03959 ATGGCATTCAGAAGCAATGAGATGCTGCTAGTGCTAAGCATGTTCTTTGTTCTAGTGTCTCTTTGGGGTGTCACAGTGGCACAACAAACTGACTCAAGTTGCACCAATGTGTTCATAAGTCTTTCTCCATGCCTTGACTACATCACAGAACAAACTTCCACTCCTTCTTCTGCTTGCTGCTCACAGCTTGCTTCTGTTATGGGGTCACAGCCACAGTGTCTATGCGAGGTTGTTAATGGCGGTGCTGCTTCGTCTATTGCTGCTAGTTTTAACATCAATCAAACCCGCGCTTTGGCTCTTCCAACTGCTTGTAATATCCAAACACCTCCTATTAACACTTGCAACGGCTCAGCTTCTTCCTCTTCTCCTCCCGCAGGTATTTCGATTTCCAACATTCCGAATTCTCCTTCAGGGAGTTTTTCATCAACTACTGGAACAACTGGAAGTATTCGAGGCTCATCGTCGTCTTATAGAACATCATCAAGTTCTGGAAAATTACAATGTTCTTTGCTTGTTCTGGTTATCTTTGCAAAATTCACATTCATATTCATGACCACTACTTAG 564 0.4326 MAFRSNEMLLVLSMFFVLVSLWGVTVAQQTDSSCTNVFISLSPCLDYITEQTSTPSSACCSQLASVMGSQPQCLCEVVNGGAASSIAASFNINQTRALALPTACNIQTPPINTCNGSASSSSPPAGISISNIPNSPSGSFSSTTGTTGSIRGSSSSYRTSSSSGKLQCSLLVLVIFAKFTFIFMTTT 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03959 187 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 116 IPR036312 -
Vivi6g03959 187 SMART aai_6 34 114 IPR016140 -
Vivi6g03959 187 CDD AAI_LTSS 41 106 - -
Vivi6g03959 187 Gene3D - 31 123 IPR036312 -
Vivi6g03959 187 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Vivi6g03959 187 PRINTS Plant phospholipid transfer protein signature 33 49 IPR000528 GO:0006869|GO:0008289
Vivi6g03959 187 PRINTS Plant phospholipid transfer protein signature 91 108 IPR000528 GO:0006869|GO:0008289
Vivi6g03959 187 MobiDBLite consensus disorder prediction 125 162 - -
Vivi6g03959 187 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 153 IPR043325 -
Vivi6g03959 187 Pfam Probable lipid transfer 20 114 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03959 Vivi-Chr6 136373125 136374135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03959 7 115 Lipid Metabolism Gene Families AT3G22600 49.541 1.20e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03959 - - gmx:100789510 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03959 6 136373125 136374135 Vivi6g03959 6 136373125 136374135 ECH
Vivi1g06440 1 145623577 145624422 Vivi6g03959 6 136373125 136374135 PCT