Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06440 ATGGCATTTAAAGGGTTTGTCTTGTGTCTAGTTATGGCCCTAGTGGCCAATATGCTAACTCAAAATGCAGCCCAATCAGGTTGTACTACTACTCTCACTAGCTTGAGTCCTTGTTTAAACTACATAATGGGAAGTTCTTCAACTCCATCAACTTCATGTTGCTCACAGCTTTCAACTGTAGTCCAATCTTCTCCACAGTGTCTCTGCTCTTTGCTTAATGGCGGTGGTTCATCTTTTGGGATCGCCATAAATCAAACTCTCGCTTTGTCTCTCCCTGGTGCTTGTAAAGTTCAAACTCCACCTGTTAGCCAGTGCAAAGGACAAACACCTCCTTCAAGTTCAACTTCTCCGGTCGCCTCTCCCGTTGGTTCTCCGACTGCAACTGAATCACCAAATGGTGCAATAACACCACCTGCTTCAGACTTTCCTTCAGGTGGAGGATCAAAAAGTGTCCCAACAACAGAAGGTGGCTCATCTGATGGAAGCAATATTAAAGTCTCGTTCCACTTTGTTCTTTTTCTTGTTACAATTGTGTTTTGTGTCACCAAATTCTGA 555 0.436 MAFKGFVLCLVMALVANMLTQNAAQSGCTTTLTSLSPCLNYIMGSSSTPSTSCCSQLSTVVQSSPQCLCSLLNGGGSSFGIAINQTLALSLPGACKVQTPPVSQCKGQTPPSSSTSPVASPVGSPTATESPNGAITPPASDFPSGGGSKSVPTTEGGSSDGSNIKVSFHFVLFLVTIVFCVTKF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06440 184 MobiDBLite consensus disorder prediction 146 160 - -
Vivi1g06440 184 SMART aai_6 28 105 IPR016140 -
Vivi1g06440 184 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 25 104 - -
Vivi1g06440 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 159 IPR043325 -
Vivi1g06440 184 Gene3D - 25 111 IPR036312 -
Vivi1g06440 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 106 IPR036312 -
Vivi1g06440 184 MobiDBLite consensus disorder prediction 102 160 - -
Vivi1g06440 184 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Vivi1g06440 184 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Vivi1g06440 184 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Vivi1g06440 184 Pfam Probable lipid transfer 11 105 IPR016140 -
Vivi1g06440 184 CDD AAI_LTSS 35 97 - -
Vivi1g06440 184 MobiDBLite consensus disorder prediction 102 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06440 Vivi-Chr1 145623577 145624422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06440 8 179 Lipid Metabolism Gene Families AT3G22600 50.286 5.69e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06440 - - gmx:100306151 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06440 1 145623577 145624422 Vivi1g06440 1 145623577 145624422 ECH
Vivi1g06440 1 145623577 145624422 Vivi6g03959 6 136373125 136374135 PCT