Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03946 ATGACTTCTCTGGCTCGTAGTGATTCTAACAAAAAGTATTCATGGTGGTGGGACAGTCACATAAGCCCCAAGAACTCAAAATGGCTTCAAGAAAATCTCACAGATATGGATGTCAAGGTGAAGCAAATGATAAAGCTTATCGAAGAAGATGCGGATTCCTTTGCCAGAAGGGCAGAAATGTATTACAAGAAGCGTCCAGAGCTTATGAAATTGGTTGAGGAGTTTTACCGGGCATATCGAGCATTGGCTGAAAGATATGATCATGCAACTGGAGTGATACGCCAAGCCCATCGTACGATGGCTGAGGCTTTTCCAAATCAAGTCCCACCGGTATCAACAGATGATTTACATGCCGTTTCTTCCGTGGAGATTGGGCAGCCACATACGCCAGATACTACCCGCCATTCACATGCATTTTCTGACTCGGATGAATTGCAAAAGGGTGATTCTACTCATGAAACAGATGTTGCAATAAGCAGAAAGGGTTTGAAACAGCTCAATGATCTTTTCATGACAGGAGAATCAGTAAGTCATATAAAGTTTGCCGAAGGACGTGCTAGAAGGGGGCTTAATTTTAATGACACACAGGAGACTAATGGAGTAAACAATGGAAGCCATGAGAATGATCTCTTGTCGGATTCCGACCGGATGACCAGAACCGAGACAGAAGTTTTGGCATTAAAGATAACCCTCGCTAAACTAGAAAGTGAAAAGGAAGATGGCTTGATTCAGTATCAGCAGAGTCTGGAGAGATTATCTAATCTGGAATCAGAAATGTCTCGTGCAAGAGAGAATTCTCAAGGACTTGATGACCGAGCCAGCAAAGCCGAAGCCGAAGTTCAAACCTTAAAAGAAACCCTTGATGAATTGCAGTCTGAACGAGAAAATAATCTTCTTCAGTACCAGCAGTGCTTAGACAAAATATCTAATCTGGAGAAAAATATTTCTTCCGCTCAAAAGGATATAGGAGATTTTAATGAACGAGCTACCAGAGCTGAAACTGAAGCCGAATCCTTAAAGGCAGACCTTGCTAGATTAGTTGCTCAAAAGGAAGCTGCTCTTTTTCAGTATAATCAGACCTTGGAGACATTGTCAAAACTAGAGGAGGAATTAGTACAAGCCGATGAGAATGCAAGGAGAATTAATGAGCAAGCTAGTGAAGCTAAAAATGAAACTGAGGACATGAGATTAGAAATCGGTAAACTTACCAAAGAGAAAGAGGAAGCGGCTCTTCGTTATCAGGAATGCTTGGAGATAATTTCTAGTTTGGAGCATAAACTCTCTTGTGCCCAAGAGGAGGTGCATGAGCTAAATTGCAAGATAAATGATGGAGCGCAAAAGTTACATATTTCTGAGCAGAAGTGTGTTCTCTTGGAAACATCAAATCACACTCTACAATCTGAATTGCAGTCTTTGGCACAGAAGATGGGGTCTCAAAGTGAAGAACTTAGTGAGAAGCAGAAGGAATTGGGTAGACTTTGGACTTGCATACAAGAAGAGAGGATGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGAATGTGCATTCTCAATCTCAGGAAGAACTTAAATCTCTTGCAGCCGAGCTTCATAATAAGATTGAAACTCTCGAGACAATGGAATTACGTAAGCAGGCTTTAGAGGATGAAGTTGACAAGGCCAAGGAGGAAAACAAAGTTCTAAATGATTTCAAACTGTCTTCATCATTGTCTATGAATAATTTGCAGGATGAGATATTAAATCTCAGGGAAACAATAAAGAAACTTGAAATGGAGGTTGGATTGCGAGTAGATGAAAGAAATGCTCTTCAGCAGGAAATTTACTGTCTTAAAGAGGAGCTTAATGATGTGAACAAAAGATACGAATCCACGGCGGAGGAGGTCAGATCAACTGGCTTACATCCACAATGTTTTTCCTTATCTGTGAAGATATTGCAAAATGAAAACTCAAAGCTGAAGGAAACAAGCGAAGCTGAAAAAGATGAAAAAGCAGCTCTCAACAAAAAACTGGAGATCATGGAGAAGCTTCTAGAGAAAAATGCCAATTTGGAGAATTCCCTTTCAGTGTTGAATGCTGAGCTGGAGCGTATCAGAGGAACGCTAAAGGCATCGGAAGAAACTTGTGAATCCTTGCTGGCGGAGAAATCAACTCTTGCTGCTGAGAAGGCAACCCTGTTTTATCAGCTGCAAACCACAGCTGAAAAGCTAGAGAAGCTTTCAAAAAAATATCAGTTTTTAGAAAATTCACTATTTGATGTGAATGCCGAGCTTGAAGGATTAAGGTTAAAGTCAAAGATTTTGGAAGAGACTTGCCTCTCACTTGATCATGAGAAGTCTAGTCTCGCCTCTGAGAAAGAAACCTTAGATTCGCAATTGAACATGACTCGTCAAACACTTAAAATTCTTGAGAAACAACATAGTGAGTTGGAACTGCAACATTTGGAATTAAAAGCAGAAAGGGAGTCTGCTCTTCAAGAGGTGGAAGATCTACTGGTTTCATTATATGCTGAAAGGGAAGAACATTCTAGAATTGTGCAATTGAATGAAGGTCACTTGGTTGAGAAGGATTTTCAAATTCATATTCTACAAGAAGATGCAAATTACCAGAAAAAGGAATCTGAAGAGGAACTGGACAGAGATCTACGCACTCAAATAGAAATTCTCATCTTGCATGAATGTATTCGGGAATCGGAGCAAAATAATTTCTCCCTTCTAGTTGAGCGTCAGAGATTCTTGGAGGCATCCAACATGTCTGACAGATTGATATCTAAATTGGAGAATGACAACGTTCAAAAGCAAGTTGATGCAAATTTGTTGTCTGAGAAAATTAACGTGCTAAGGAATGTGCTGCTTCAAGTGTTAAAGACTCTTGACAATAACTGTGAGCATTTGCCTCAAGAAAATGTGGAAGATGACCAGAAGCTGCTGAACAATGTACATGACAAACTTCAGGAGAAAGAAAATTCTTTTGTCGAAGTATTTCGTGAAAACCAGCAAATGGCCATTGAGAATTCAGTTCTTGTTACATTCCTTGGCCAGTTGAAATTAAAGACTGAAAATATTGCAACAGAAAGAGAAGCTCTTGATGGAGAATTGAGGATCCAGTCTAAGCAATACTATGCATTGCAAGAAGAGGTCAAAAAGACGCTAGAGAAGAATCAGGCATTGAAGTTAACAGTAAGAAAAGGAGAAGAGAAAATGGAAGTAATGACAACTGAAAATTTGATGGCACTTATGGAGCTAAGCAAAGAACTGGATGAACTTGTTTCAGTAAATACCAACCTTGAAGAGAGATTGAAAGTAGTGATGGGAAAATTAGAAGATGTGCAAATGGAAAACTCATATCTTAAGGAGTCATTTGTAGTGTCGAACGTTGAACTAAAATTAGTTGAATCTGTCAATGATAAGTTAAATTGTCAGATTAGGAATGATAAAGCCTTATTGTACCAAAAGGAAAATGATATTTTGGAAGCAGCAGAGATGTTTAGTGCTTTACAGGAAGAAAAAAAAGCATTGCAAAAATTGGTGATAGATCTGAAGAGTAAGTATGCAGAGGCGATGGCATTACTTGAAGACCAAGGCAGACAAATTTTAAAATTATCGTCAGACAAGGATCATCAAATTGAAGAGCATGAATACCTTCGTGAAGTGAATAAGAAGTTGGAGGCAGATATGAGGCACCTGCAACAAGAGCTTGGAGAAACTAAACTGATGGAAAAAAAGCTAAGTAATGCATTACTCAAGGGAGCGGATGAGATTGAACAATGGGAATCTCAGGCTGCCACATTCTATACTGGAATGCAGATTTCTACTGTCAATGAGACATTCTTTGAAGGGAAGGTCCGTGAGCTAGCTGATGCGTGTGAGAATCTTGAATTCAGATGCAGCTCCAACGTTATGGAAAGTGAAAAGCTGAAAGAAAGTGTTGACAAGTTGGAAGATGAAAACAAGAAATTACAGGTCCAGATGGCTGCTTATGTCCCAGCTGTCAGTGGTTTGAATGATTGTATAACATCCTTGGAGATGCAGACACTTGGTCAAGCAAAACCTCGTGACTTCAAAGAATCAAAGGTTAAAAAGTTGGTGAATATCAAATACGCTGAAGGTGATCCACGAACAAGTGAAGATCAAAATGCTACGGAAACAGATGCACTTCCAGACTTCCAAGACATGCAGAAAAGGGTTAATGCAATTGAAATGGCTATTAGACAGATGAATGAAAGTTTCAAACCTAAGGATGAAATGAGAGAGATTCAAGTTTTAAAATCTGGACATAGCTGGCACCAAGGAAATGCTCAAGCAAACAAGCATTCTACTCAAATGGATGAAGCCAAGGAGCATCAATATGGAGCTGTTTATGGACATAAGACAAGAAAATCTTTGCAAGATATTCCTGTATCAGAAATCGAAGTTCTTCCAAAAGATATCATGCTTGATCACACGTCTGAATGTTCATCGTATGGGATTAGTAGGAGAGGAGCTCATAAGTCTGATGAGCAGATGCTTGAATTGTGGGAAACTGCTGATCAGCATGGCATTATTGGCGTGACAGTTGGCAAGGCACAGAAGGACACTTCACCTATTGGATACCAACAAAGGAGACTATCCAAGGAATCCAAAAATAAATACCCTTCGGTAGAGTCCTTGATTGAAAAGGAATTGAGTATGGACAAATTAGAGATCTCAAGAACACAGTCGCGGCCGCTGCTGCTTGAAGGCAATAAGAGAAAGGTTTTAGAAAGACTCGACTCAGATGCTCAAAAGCTGATGAACCTCGAAATCACCGTACAGGATTTGATAAACAAGATGGACATTATTGAGAAGACGGGCACAGTGGGAAAAGGAGTTGAGTACGTTGACGTGAAAGGAAAGCTTGAAGCTGCTCAAGAGGCCATCACAAAGCTGTTTGATGCCAACCGCAGGTTGATGAAGAATGTAGAAGAAGGAACTTCGTCCTTTTCCGGGAAGTCTACAACAGTGTCAGATGAGAGTGGAAGTGTCGGCGGCAGAAGAGTTTCAGAACAGGCTCGAAGAGGATCTGAAAAAATAGGACGGCTACAATTGGAGGTGCAAAGGCTTCAATTTTTACTTCTAAAATTGAATGATGACAAAGAAGGCAATGGAAAAGCAATGATTGATGATCAAAATCCAAGAGTCCTTTTGCGAGATTATCTCTATGGTGGGACAAAGAAAAGCTACTACAAGAGGAAGAAGAAAGCCTCCTTTTGCGCATGCATACAACCTCCAACCAGAGGAGATTGA 5268 0.4 MTSLARSDSNKKYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPPVSTDDLHAVSSVEIGQPHTPDTTRHSHAFSDSDELQKGDSTHETDVAISRKGLKQLNDLFMTGESVSHIKFAEGRARRGLNFNDTQETNGVNNGSHENDLLSDSDRMTRTETEVLALKITLAKLESEKEDGLIQYQQSLERLSNLESEMSRARENSQGLDDRASKAEAEVQTLKETLDELQSERENNLLQYQQCLDKISNLEKNISSAQKDIGDFNERATRAETEAESLKADLARLVAQKEAALFQYNQTLETLSKLEEELVQADENARRINEQASEAKNETEDMRLEIGKLTKEKEEAALRYQECLEIISSLEHKLSCAQEEVHELNCKINDGAQKLHISEQKCVLLETSNHTLQSELQSLAQKMGSQSEELSEKQKELGRLWTCIQEERMRFIEAETAFQTLQNVHSQSQEELKSLAAELHNKIETLETMELRKQALEDEVDKAKEENKVLNDFKLSSSLSMNNLQDEILNLRETIKKLEMEVGLRVDERNALQQEIYCLKEELNDVNKRYESTAEEVRSTGLHPQCFSLSVKILQNENSKLKETSEAEKDEKAALNKKLEIMEKLLEKNANLENSLSVLNAELERIRGTLKASEETCESLLAEKSTLAAEKATLFYQLQTTAEKLEKLSKKYQFLENSLFDVNAELEGLRLKSKILEETCLSLDHEKSSLASEKETLDSQLNMTRQTLKILEKQHSELELQHLELKAERESALQEVEDLLVSLYAEREEHSRIVQLNEGHLVEKDFQIHILQEDANYQKKESEEELDRDLRTQIEILILHECIRESEQNNFSLLVERQRFLEASNMSDRLISKLENDNVQKQVDANLLSEKINVLRNVLLQVLKTLDNNCEHLPQENVEDDQKLLNNVHDKLQEKENSFVEVFRENQQMAIENSVLVTFLGQLKLKTENIATEREALDGELRIQSKQYYALQEEVKKTLEKNQALKLTVRKGEEKMEVMTTENLMALMELSKELDELVSVNTNLEERLKVVMGKLEDVQMENSYLKESFVVSNVELKLVESVNDKLNCQIRNDKALLYQKENDILEAAEMFSALQEEKKALQKLVIDLKSKYAEAMALLEDQGRQILKLSSDKDHQIEEHEYLREVNKKLEADMRHLQQELGETKLMEKKLSNALLKGADEIEQWESQAATFYTGMQISTVNETFFEGKVRELADACENLEFRCSSNVMESEKLKESVDKLEDENKKLQVQMAAYVPAVSGLNDCITSLEMQTLGQAKPRDFKESKVKKLVNIKYAEGDPRTSEDQNATETDALPDFQDMQKRVNAIEMAIRQMNESFKPKDEMREIQVLKSGHSWHQGNAQANKHSTQMDEAKEHQYGAVYGHKTRKSLQDIPVSEIEVLPKDIMLDHTSECSSYGISRRGAHKSDEQMLELWETADQHGIIGVTVGKAQKDTSPIGYQQRRLSKESKNKYPSVESLIEKELSMDKLEISRTQSRPLLLEGNKRKVLERLDSDAQKLMNLEITVQDLINKMDIIEKTGTVGKGVEYVDVKGKLEAAQEAITKLFDANRRLMKNVEEGTSSFSGKSTTVSDESGSVGGRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDDKEGNGKAMIDDQNPRVLLRDYLYGGTKKSYYKRKKKASFCACIQPPTRGD 1755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03946 1755 Coils Coil 644 723 - -
Vivi6g03946 1755 Coils Coil 787 828 - -
Vivi6g03946 1755 MobiDBLite consensus disorder prediction 192 212 - -
Vivi6g03946 1755 Coils Coil 1304 1324 - -
Vivi6g03946 1755 Coils Coil 731 758 - -
Vivi6g03946 1755 Coils Coil 1157 1184 - -
Vivi6g03946 1755 Coils Coil 511 566 - -
Vivi6g03946 1755 Coils Coil 1213 1240 - -
Vivi6g03946 1755 Coils Coil 469 489 - -
Vivi6g03946 1755 MobiDBLite consensus disorder prediction 1650 1670 - -
Vivi6g03946 1755 Coils Coil 1591 1611 - -
Vivi6g03946 1755 MobiDBLite consensus disorder prediction 1650 1680 - -
Vivi6g03946 1755 Gene3D - 216 386 - -
Vivi6g03946 1755 Coils Coil 924 944 - -
Vivi6g03946 1755 Coils Coil 574 594 - -
Vivi6g03946 1755 MobiDBLite consensus disorder prediction 124 154 - -
Vivi6g03946 1755 Coils Coil 245 405 - -
Vivi6g03946 1755 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Vivi6g03946 1755 Coils Coil 602 633 - -
Vivi6g03946 1755 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Vivi6g03946 1755 Coils Coil 413 440 - -
Vivi6g03946 1755 Coils Coil 1627 1647 - -
Vivi6g03946 1755 PANTHER PROTEIN NETWORKED 4A 326 1041 - -
Vivi6g03946 1755 Coils Coil 1390 1410 - -
Vivi6g03946 1755 MobiDBLite consensus disorder prediction 134 154 - -
Vivi6g03946 1755 MobiDBLite consensus disorder prediction 192 208 - -
Vivi6g03946 1755 Coils Coil 1080 1114 - -
Vivi6g03946 1755 Coils Coil 968 988 - -
Vivi6g03946 1755 Coils Coil 217 237 - -
Vivi6g03946 1755 SUPERFAMILY Tropomyosin 406 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03946 Vivi-Chr6 136192811 136199874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03946 - - vvo:131610144 3338.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03946 6 136192811 136199874 Vivi6g03946 6 136192811 136199874 ECH
Vivi6g03946 6 136192811 136199874 Vivi1g06450 1 146065812 146072498 PCT