Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06450 ATGGCAACTCTGTCTCAAGCTAATTCTACGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGCCCTAAGAACTCGAAATGGCTCCAAGAAAATATTACCGATATGGATTTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCGGATTCCTTTGCCAGGAGAGCGGAGATGTACTATAAAAAACGGCCGGAGCTTATGAAAATGGTCGAGGAGTTTTATAGGGCATACCGAGCGTTGGCTGAGAGATACGATCATGCAACTGGAGTGATCCGTCAAGCCCATCGGACCATGTCTGAAGCATTTCCTAATCAAGTTCCTATGATGATCACAGATGACATGGAGCCCGAGCCGCGTACTCCTGATACTCGCCACCCTTCACGTGCATTTCTTGATTCGGATGAATTAGAAAAAGACGCTCATGTTATCAAAAGAAACGGAGCAAATAGTGAAGAGAATTATTCTTCTTTGAACAATACAGGTTTAAGACAGCTCAATAACCTCTCCATCCCTCGAGAGCACGCCAAGTTTGCAGAAGGGCGTGCTAGAAGGGGGCTCAATTTTTTAGAGACGGAGGAGGAAACTAGCGAGCTGAAAAACGGAAGCCAAAACACTAAGGCTCAAGTTTCGTCTGAGTCGGAACGTGTGACAAAAGCTGAAGCGGAAATTTCAGCCTTAAAGGAAGCCCTTGCCAAATTACAAGAGGAAAAGGAAGCTGGGTTGGTTCAGTATCAGAAGAGTTTGGAGAAATTATCTAATCTTGAATTAGAAGTGTCTTCGGCACAAGAGATTTATCAAAAACTTGATGAACGAGCAAGCAAATCAGACGCTGAAGTTCAAAGCTTGAACGAAGCGGTAATCAAATTACAGAATGAAAGGGAAGCTTATCTTCTTCAATACCAGGAATGCTTGGAGAAAATAACCAATCTGGAGAAAAATGTTTCTTCTGCTGAGAATAATGCCGAAGAGTTTAACGAACGCGCTACTAAAGCTGAAACTGAAGTTGAGTTGTTGAAGCAGGACCTCGTTCGAGTAGAAGCTGAAAAGGACGCTGCTCTTGTTGAATATAAACAGTGCTTGGAGACTTTATCGAAACTGGAGAAGAGATTAGAAGAATCCGAGGAGAACTCTAGAAGGATTAACGAGCAAGCTACTATAGCTCGAAACGAAATCGAGGCTTTGAAGTTGGAAGTTGCTAAACTTAATGAAGAGAAGGAAGACAATGCTCTCCGGTATCAGCAGTGCTTGGAGATAATTTCCAGTTTGGAACATAAACTTTCGTGTGCCGAAGAGGAGGTTCGTCGGTTAAATTCGAAGATAGACGACGAGGTTGAAAAGTTACATAGTTCCGAACAGAAATGTCTTCTTTTGGAAACATCAAATCATGCTCTAAAGTCTGAGTTACAGTCTTTAGAACAAAAGACGGGGTCTCAAAGTGAAGAACTTAATGAAAAGCAGCAAGAATTGAGTAAACTCTGGAGTCGCGTGCAAGAGGAGAGACAGCGTTTCATTGAGGCTGAAACCGCTTTCCAAACTCTTCAGCATTTGCATTCTCAATCTCAGGAAGAGCTTAGATCTTTTGCTGCCAACTTGCACAGTAAAGCGGAATTACTCAGGAGTATGGAATCGTGTAAGCAGGCTCTAGAGGATGAAGTGCGCAAAGTCAACGAGGAAAACAAAATTCTAAACGAGGTCAAGGTTTCTTCTTCTTTGTCTATAAAAACTTTGCAGAGTGAGATATTGAATTTGAAAGACACAATAGAGAAACTCGAACAGGAGGTTGAGCTGCGACTCGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGGTTTGAATAAAAAACATGAAGCTATGATAGACGAGGTCAGGTCAGCTGACTTAGATCCTCAGTGCTTCGGCTCGTCTGTGAAAAAATTGCAAGACGAGAACTCGAAGCTCAAAGAGATGTGTGAGGCTGAGAAAGATGAGAAAATAGCCCTTTTGGTGAAATTGGAAACAATGGAGAGACTTTTGGAGAAAAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATTCGGAGTTGGATAGTCTCAGAGGAAAGGTAAATGTTTTGGAAGAAACATGCCAGACTTTGCTTGTGGAGAAATCAACTCTTTCTTCTGATAAGGACACCTTGTTTTCTCAATTACAAGCCGCAACCGAGAAGCTGGAGAAGCTCTCTGAAAGTAACAACCTTTTGGAAAATTCACTATTTGATGTCAATGCTGAACTCGATGGATTAAGGGGAAAGTCGAAGATCTTAGAAGACACATACCAGTTACTTGATCATGAGAAGTCCTCTATCTTTTCAGAGAAAGAAGCCTTAGTTTCAGAGTTGAACACCACTCGCCAGATGCTGAACGGTCTTGAAAAACAACACGGTGAATTGGAACTTATGCATTCGGAGCTAAAAGGAGAAAGGGAGTCTGCACTTCAAAAGGTAGAAGAGCTATTGGTTTCCCTATACTCTCTGAGAGAAGAACATTGCAGAGTTTTGAAATTGAATGAAGACGAAGTGGCAAACAAGGAGTTACAAATTCAGACTATGCAAGAAGACGCAAAGTGCCGGAAAGAAGAATATGACGAGGAGCTCGATAGAGCTCTACATGCTCAAATTGAAATTTTCATCATGCAGAAGTTTATCCAAGATTTGGAGAAGAAAAACTTTTCTCTTCTAGTTGAGTCCCAGAAACTTTTGGAGGCGTCTAAATTGTCAGACCGAATGATTTCTAAATTGGAGACTGAAAGTATTCAAAAGCAAGACGATGTGAATTCTTTGTCAGAGAAACTTAAAATACTAAGAATCGGGCTGCTTCAGGTGGTGAAGACTCTTGACACTAACGGGAATCATTTCTTTGAAGACATGCTTGATGAAGACCAAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGACAAGAGTCTTTTGACGCAATTTTCAACGAAAGCCACCACATGGCCGTTGAGAATTCAATGCTTTTTGCATTTCTTGAACAGTTGAAATTAAACATTGAAAATCTCATGAAAGAAAAAGGCGCGCTTATCGAAGAGTCCAGGATACAGTCTAAGAAGTTCATGGAATTGCAAATGGAGTTCCAAAAGATTTTGGAGATGAATCAAGAGTTGAAGCGGACAATAATCAAAGGAGAAGAGAGAATAGAAGGAATGACAGCTGAAATGGATAATCTACGCAAAGAGCAGTTGGACTTGGAAAAGAGCCACAGAAACTTACAGGAGGAAAACTGCACGATATTTGAAGAGAAAAAGTCCTTGATGGGAAGATTTAAAGATATGGGTGAAGAGAAAGATAACTTGGAAAAAGAAATATGTGTCATGTTCCATGAGACATTAGTTCAATCTAATATTTCCGTGGTTTACCAGAATATTGTATTTGAAAAACTCCGGGAACTGGAACAGCTTGGTCAAGAACTTGATAAGCTCGGTTCAGAAAATAATGACCTTGAGGAGAGATTGAAGATAATGGCACACAAATTAGAGAACGAAGAAAAGGAAAATTCTCATCTTAAAGAGTTATTTGTAAAGTCAAATGTTGAATTGAATTTAGTTGAATCTGTCAATGATCAATTGAGCTGTCAAATTAGAAATGAAAAGGAAATGTTGTGTCAAAAGGAAATTGTGCTTTTGGAAGCAGCTAAGACGTTTCATGCTTTACAGGCCGAGAAGAAGGAATTACAAAGAACAGTGGAAGATCTGAGAATTAGATATGATGATGCCACGAAGAAACTTGAAGAGCAAGCTAATCAAAATTTTAAGTTGTCCTCAGACAAGGACCGTCAAAATCAAGAGCTTGGAGACCTTTACGAAGCAAACCAAAATTTGGAATCTTTAATGAAGTCCCTACACCATGAACTTGAAGAAACTAAAATGAGGGAAGAGAAGCTAAATTTTGAAGTACGTGAAGGAATAAATGAGATTGAACAATGGGAAACTCAGGCTACAGCACTATACGCTGAACTGCAGATTTCTGCTGTCAATGAAACATTATTTGAAGGGAAGGCCTGCGAGCTAGCTGATACATGTGAGCATCTTGAGCGGATAAACAGCTCAAAAGACATGGAAAGTGAACAGATGAAAGAGTTAGTTAGCAAGTTGGAAGGTGATAATGCGAGACTATATGGTCAATTAGCTGCTTATGTTCCAGCTATCAGTGCTTTGAGTGATTGTGTGACATCCCTAGAGGTGCAGACTCTTGGACATGCAAAACATCATGACTATGAAAAACCGGAGGTTAAGAATTTGGTGAATGACCAATACACTGAAAATGGTCAACAGATAGATGAAGATCAGACTGTTACGAAACCAGATCCACTTCTTGAATTCCAAAACCTGCAGAGGAGGATCAATGAAATTTCAGTGGCAGTTAATAATTTGAACGTAAGTTTCAAACCGGAGAATGAAATGAGAGAGATTCAAGAAGCAAAGGAGAAGTCAAGGCCAGATAATCCTGTAACTGAGATTGAAGTACTGCCAAAAGACATCATGCTTGATCACATATCTGAAAGTTCATCCTATGGAATAAGCAGGAGAGGAACTCATGAGTCTGATGATCACATGCTTGAGTTGTGGGAAACTTCTGATAAGACACAGAAGATGGCAGGAGAATCGGTGGAAGATCATCATCAAAGAGGAGTGGCCAAAAAACCTTACAACAAACATCCTTCTGGAGATTCCTTGTTGGAAAAGGAATTGAGTGTGGACAAGTTAGAGATCTCAAGAAGATTGTCACGGCCGCGCGAAGAAGCCAACAAGAGCAAGGTTTTGGAAAGACTTGATTCCGATGCACAGAAGTTATCAAACCTTCAAATAACCATACAAGATTTGATGAAGAAAGTGGAAACTACTGACAAGAGCACAAAAAGGAAAGGTGCCGAGTATGATATGGTTAAAGAACAGCTTGAAGCTTCTCAGGAGACCGTCATGAAGTTGTTCGATGCCAACCGCAAGCTGATGAAAAATGTAGAAGAGGGTGCATTGTCTTCAAATGGAAAGGCAGCAGGAGAGTCGGATGAGATTGGAAATGTCAGCAGGAGGAGAGTTTCGGAACAGGCGCAAAGAGGATCAGAGAAAATAGGACAACTTCAGTTGGAGGTGCAAAGACTGCAGTTTCTTCTTTTGAAACTGAATGATGGAAGGGAAATCAAAGAGAAAACAGGAATGGCTGATCAAAGTCCGAGAGCACGTTTGCGAGATTATCTCTATGGCGTGACAAGAACCAACCACCAAAAGAAGAAGAAAACACATTTTTGTGCATGTGTAAGACCACCCACCAAGGGAGATTGA 5352 0.4045 MATLSQANSTRMYSWWWDSHISPKNSKWLQENITDMDFKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRQAHRTMSEAFPNQVPMMITDDMEPEPRTPDTRHPSRAFLDSDELEKDAHVIKRNGANSEENYSSLNNTGLRQLNNLSIPREHAKFAEGRARRGLNFLETEEETSELKNGSQNTKAQVSSESERVTKAEAEISALKEALAKLQEEKEAGLVQYQKSLEKLSNLELEVSSAQEIYQKLDERASKSDAEVQSLNEAVIKLQNEREAYLLQYQECLEKITNLEKNVSSAENNAEEFNERATKAETEVELLKQDLVRVEAEKDAALVEYKQCLETLSKLEKRLEESEENSRRINEQATIARNEIEALKLEVAKLNEEKEDNALRYQQCLEIISSLEHKLSCAEEEVRRLNSKIDDEVEKLHSSEQKCLLLETSNHALKSELQSLEQKTGSQSEELNEKQQELSKLWSRVQEERQRFIEAETAFQTLQHLHSQSQEELRSFAANLHSKAELLRSMESCKQALEDEVRKVNEENKILNEVKVSSSLSIKTLQSEILNLKDTIEKLEQEVELRLDERNALQQEIYCLKEELNGLNKKHEAMIDEVRSADLDPQCFGSSVKKLQDENSKLKEMCEAEKDEKIALLVKLETMERLLEKNSVLENSISDLNSELDSLRGKVNVLEETCQTLLVEKSTLSSDKDTLFSQLQAATEKLEKLSESNNLLENSLFDVNAELDGLRGKSKILEDTYQLLDHEKSSIFSEKEALVSELNTTRQMLNGLEKQHGELELMHSELKGERESALQKVEELLVSLYSLREEHCRVLKLNEDEVANKELQIQTMQEDAKCRKEEYDEELDRALHAQIEIFIMQKFIQDLEKKNFSLLVESQKLLEASKLSDRMISKLETESIQKQDDVNSLSEKLKILRIGLLQVVKTLDTNGNHFFEDMLDEDQTLLNHIHGKLKERQESFDAIFNESHHMAVENSMLFAFLEQLKLNIENLMKEKGALIEESRIQSKKFMELQMEFQKILEMNQELKRTIIKGEERIEGMTAEMDNLRKEQLDLEKSHRNLQEENCTIFEEKKSLMGRFKDMGEEKDNLEKEICVMFHETLVQSNISVVYQNIVFEKLRELEQLGQELDKLGSENNDLEERLKIMAHKLENEEKENSHLKELFVKSNVELNLVESVNDQLSCQIRNEKEMLCQKEIVLLEAAKTFHALQAEKKELQRTVEDLRIRYDDATKKLEEQANQNFKLSSDKDRQNQELGDLYEANQNLESLMKSLHHELEETKMREEKLNFEVREGINEIEQWETQATALYAELQISAVNETLFEGKACELADTCEHLERINSSKDMESEQMKELVSKLEGDNARLYGQLAAYVPAISALSDCVTSLEVQTLGHAKHHDYEKPEVKNLVNDQYTENGQQIDEDQTVTKPDPLLEFQNLQRRINEISVAVNNLNVSFKPENEMREIQEAKEKSRPDNPVTEIEVLPKDIMLDHISESSSYGISRRGTHESDDHMLELWETSDKTQKMAGESVEDHHQRGVAKKPYNKHPSGDSLLEKELSVDKLEISRRLSRPREEANKSKVLERLDSDAQKLSNLQITIQDLMKKVETTDKSTKRKGAEYDMVKEQLEASQETVMKLFDANRKLMKNVEEGALSSNGKAAGESDEIGNVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNDGREIKEKTGMADQSPRARLRDYLYGVTRTNHQKKKKTHFCACVRPPTKGD 1783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06450 1783 Coils Coil 1014 1034 - -
Vivi1g06450 1783 Coils Coil 575 634 - -
Vivi1g06450 1783 Coils Coil 1056 1097 - -
Vivi1g06450 1783 Coils Coil 788 822 - -
Vivi1g06450 1783 MobiDBLite consensus disorder prediction 1694 1708 - -
Vivi1g06450 1783 Coils Coil 211 490 - -
Vivi1g06450 1783 MobiDBLite consensus disorder prediction 1682 1709 - -
Vivi1g06450 1783 PANTHER PROTEIN NETWORKED 4A 272 376 - -
Vivi1g06450 1783 Coils Coil 1280 1314 - -
Vivi1g06450 1783 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Vivi1g06450 1783 Coils Coil 1105 1125 - -
Vivi1g06450 1783 MobiDBLite consensus disorder prediction 195 218 - -
Vivi1g06450 1783 SUPERFAMILY Tropomyosin 386 631 - -
Vivi1g06450 1783 Coils Coil 540 567 - -
Vivi1g06450 1783 Coils Coil 645 665 - -
Vivi1g06450 1783 Gene3D - 663 847 - -
Vivi1g06450 1783 MobiDBLite consensus disorder prediction 1554 1568 - -
Vivi1g06450 1783 Coils Coil 848 886 - -
Vivi1g06450 1783 Coils Coil 1231 1272 - -
Vivi1g06450 1783 Coils Coil 676 717 - -
Vivi1g06450 1783 Coils Coil 1154 1195 - -
Vivi1g06450 1783 Coils Coil 1614 1634 - -
Vivi1g06450 1783 MobiDBLite consensus disorder prediction 1551 1584 - -
Vivi1g06450 1783 Coils Coil 925 945 - -
Vivi1g06450 1783 Coils Coil 725 759 - -
Vivi1g06450 1783 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06450 Vivi-Chr1 146065812 146072498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06450 - - adu:107473391 2188.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06450 1 146065812 146072498 Vivi1g06450 1 146065812 146072498 ECH
Vivi6g03946 6 136192811 136199874 Vivi1g06450 1 146065812 146072498 PCT