Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03941 ATGGAACCAATCAATTGTATGCAGCCTGAGTTTGTTCCAAGCGGTGGCCACCGCACTCCTTTGCCGGAGAGTCCTCGAGTTCCTATGGAGTTTCTGTCAAGGTCATGGAGTGCTTCAGCTCTTGAAGTCACAAAAGCTATTGCACCACCTCAATCTCAACCACCTCTTTCATCATGCATGCCATCAAATGGTTCTATTCCTGAAGAAAACAGTATCTACTCTATCTCTGAGGAACTCTCGAATGTGTCTAAGAATCAGTTTTCTTTCGCTTCCTCTGCTACTTCACAGCTTGTCCTTGAACGCATTATGTCACACTCTGCTAGAGAGGAAGTGTCACCATTAACATCAGGTCGATTATCTCACAGCAGTGAGCCTTTGAATGGTAATGGATCATTAACAGGAACAGACAGTCCACCAGTTTCTCATTCAGATGAATTCGACGACGTTGTTAAGTTTTTTCGGGCAAACAATTCTATTCATCCATTGTTTAATGGTGGAAGAGCGAATGGGGCCATAGGCAACGGCACAGCCACTTCAGGACCTAAAACTGTAGGAAGATGGTTGAAGGAGAGAAGAGAAAAGAAAAAAGAAGAAAGCAGAACACATAATGCTCAGATGCATGCTACTATTACTGTGGCTGCTGTTGCTGCTGCTATAGCAGCCATTGCAGCTGCAACAGCTGCCTCATCGACATCAAACAAGGACGAGAAAATGGCCAAGACTGACGTGGCTGTTGCTTCCGCTGCAACGTTAGTTGCTGCACAATGTGTGGAGGCTGCTGAAGCAATGGGAGCCGAGCGTGACCACCTAGCTTCAGTGGTCAGCTCAGCTGTGAATGTCCGATCTCATGATGATATATCTACTCTTACAGCTGCAGCTGCCACAGCTCTCCGAGGAGCGGCAACGTTAAAAGCTAGAGCTCTGAAGGATGTATGGAACATTGCTGCAGTAACACCACTGGAGAAAGGAATAGGGGGCATGACAGTAAGTGGAAAAGGGAATAACATAAACAACAGCAACAGCAGCACCAGTGACAGTGGAGAAATTATAAATGCAGATAACTTTACAGGTTCCAGCATCCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAACGCACCCGTAACGGTGATCTGCATTGGAAAATAGTTTCTGTTTACATACATCGATCAGGACAGGTAAAGCTAAAAATGAAAAGCAAACTTGTTGCAGGAAAAATTACAAAAAAGAACAAGAATATTGTTCTAGACGTGTGCACGGATTTACCAGCATGGCCAGGAAGAGATATTTTAGAAGATGGAGAAAAACGACACTACTTCGGATTGAAAACAGACACGAGGGGAATCGTCGAGTTCGAGTGTAGAACTCAAAAAGAATATGATATCTGGACACAAGGAGTTTCTAAGCTTCTCTCAATCGTCAGACAAAGACAAAACAAATACAACAATTGA 1452 0.4415 MEPINCMQPEFVPSGGHRTPLPESPRVPMEFLSRSWSASALEVTKAIAPPQSQPPLSSCMPSNGSIPEENSIYSISEELSNVSKNQFSFASSATSQLVLERIMSHSAREEVSPLTSGRLSHSSEPLNGNGSLTGTDSPPVSHSDEFDDVVKFFRANNSIHPLFNGGRANGAIGNGTATSGPKTVGRWLKERREKKKEESRTHNAQMHATITVAAVAAAIAAIAAATAASSTSNKDEKMAKTDVAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDISTLTAAAATALRGAATLKARALKDVWNIAAVTPLEKGIGGMTVSGKGNNINNSNSSTSDSGEIINADNFTGSSIQELLAKGSELLKRTRNGDLHWKIVSVYIHRSGQVKLKMKSKLVAGKITKKNKNIVLDVCTDLPAWPGRDILEDGEKRHYFGLKTDTRGIVEFECRTQKEYDIWTQGVSKLLSIVRQRQNKYNN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03941 483 PANTHER EXPRESSED PROTEIN 18 475 IPR040269 -
Vivi6g03941 483 MobiDBLite consensus disorder prediction 109 140 - -
Vivi6g03941 483 Pfam Plant pleckstrin homology-like region 369 474 IPR013666 -
Vivi6g03941 483 Pfam Auxin canalisation 22 323 IPR008546 -
Vivi6g03941 483 MobiDBLite consensus disorder prediction 108 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03941 Vivi-Chr6 136102639 136104710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03941 - - gmx:100805743 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03941 6 136102639 136104710 Vivi6g03941 6 136102639 136104710 ECH
Vivi6g03941 6 136102639 136104710 Vivi1g06459 1 146363528 146366666 PCT