Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06459 ATGGAACCAAAGTTCAGAATCAATTGTAACAGAAATAACAATGACTTCCCTCCAACAACAAACAATGCCACTACTCGTTTGCCAGAAAGTCCAAGAATACCAATGGAGTTTCTCTCAAGGTCATGGAGTGCTTCTGCATTTGAAGTCTCTAAAGCCTTGTCACCTCAACCACCACCTCCTCCTCCTTCTTCTTGTTTACCTTCTAATAAACCTTCTACTGTCTCTATACCTGAAGAAACCATGTCTGGAAATCAATTCTCTTTTGCAACTTCTGCTACTTCACAGCTTGTCCTTGAACGCATCATGTCACAGTCTGCAAGAGAGGAAGTATCTCCATTAACATCAGGTAGACTGTCTCATAGCAGTGAACCATTGAATGGTGGTGGTTCTTTAACAGGAACAGATAGTCCTCCAATTTCTCCTTCTGATGAATTTGATGATGTTATTAAGTTTTTTCGTGCAAACAATTCTATACATGCTTTATTCAATGGTACAAGAGCTATGAGCAGTGGAATTGGCAATGCAACTCCAAGTTCAGGACCAAAAACAGTAGGAAGGTGGTTGAAAGAAAGAAGAGAGAAAAAGAAAGAAGAGAACAGGAGCCATAATGCTCAAGTTCATGCTGCTATTTCTGTAGCAGCAGTGGCATCTGCCGTTGCTGCCATCACAGCAGCAACGGCAGCATCGTCTGCGTCAAACAAGGATGAGAGAATGGCTAAGACTGATATGGCTGTGGCTTCTGCAGCAACACTGATTGCTGCTCAGTGTGTTGAGGCTGCTGAAGCAATGGGAGCTGAGAGAGAACACCTTGCTTCTGTTGTTAGTTCTGCTGTCAATGTGAGATCTCATGATGATATTACTACTCTAACTGCTGCAGCTGCCACAGCTCTAAGGGGGGCAGCAACATTGAAAGCAAGAGCATTGAAAGAGATGTGGAATATTAGTGCTGTGACGCCGCTAGAGAAAAGCATAGGAATTGGAATATGCGGCGGTAAAGCCAATACTAACAGTAGTTCTAGTACTAGTGATAGTGGTGGAGAGATTATCAATGCAGATAATTTTCTAAGTGCTTGCAGTCAAGAACTTCTTGCTAGAGGAACCGAATTGCTTAAACGCACCCGTAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTATATTCATCGAACCGGTCAGGTGATGCTGAAAATGAAAAGCAGACATGTTGCAGGAACAATTACAAAAAAGAAAAAGAATGTAGTGTTAGATGTGTGCATGAATTTAGCAGCATGGCCAGGAAGGCATCTATTAGAGGATGGTGAAAAAAGAAGGTACTTTGGATTGAAGACAGAATCAAGAGGTTTAGTTGAGTTTGAATGTAGAAATCAAAGAGAATATGAATTGTGGACTCAAGGTGTTTCAAGACTTCTTTCAATTGTTTCACATAGGAAAAACAGAATCTAA 1443 0.4116 MEPKFRINCNRNNNDFPPTTNNATTRLPESPRIPMEFLSRSWSASAFEVSKALSPQPPPPPPSSCLPSNKPSTVSIPEETMSGNQFSFATSATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVIKFFRANNSIHALFNGTRAMSSGIGNATPSSGPKTVGRWLKERREKKKEENRSHNAQVHAAISVAAVASAVAAITAATAASSASNKDERMAKTDMAVASAATLIAAQCVEAAEAMGAEREHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEMWNISAVTPLEKSIGIGICGGKANTNSSSSTSDSGGEIINADNFLSACSQELLARGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCMNLAAWPGRHLLEDGEKRRYFGLKTESRGLVEFECRNQREYELWTQGVSRLLSIVSHRKNRI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06459 480 MobiDBLite consensus disorder prediction 107 139 - -
Vivi1g06459 480 MobiDBLite consensus disorder prediction 53 67 - -
Vivi1g06459 480 Pfam Auxin canalisation 28 322 IPR008546 -
Vivi1g06459 480 MobiDBLite consensus disorder prediction 7 28 - -
Vivi1g06459 480 MobiDBLite consensus disorder prediction 50 78 - -
Vivi1g06459 480 Pfam Plant pleckstrin homology-like region 368 473 IPR013666 -
Vivi1g06459 480 MobiDBLite consensus disorder prediction 107 142 - -
Vivi1g06459 480 MobiDBLite consensus disorder prediction 1 30 - -
Vivi1g06459 480 PANTHER EXPRESSED PROTEIN 22 475 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06459 Vivi-Chr1 146363528 146366666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06459 - - gmx:100782024 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06459 1 146363528 146366666 Vivi1g06459 1 146363528 146366666 ECH
Vivi6g03941 6 136102639 136104710 Vivi1g06459 1 146363528 146366666 PCT