Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03928 ATGGAAGCAAATGTTTTTAGCCAAAACAGAATTTCAAAACTAACTTCTTCAACTCTCTTCAATCTCATCAAACATAAACCTCAACATGCACCTTCCGTAGTTTCCGTGCTCAGAAACACTTCGAATCATGACATTAATGACAAAACAACGAACAATAGTACTAGAACTGTCTACAAAGATAGTTGGTTTGATCTCGTGGCAATAAACCATTTATCAAAAAGTGTTCAAGCTGCCACAGGAATTAGAAACAATGAAAGTGGCTATGAGAGTCTTGTTGAGGCCGCTATTATGGCGAAACAGAAATTTAATTCTATTGAGCAGCAAGAGGTTATCATTCAAGCTCTGAATAGACTCTTCCCAGAGTCAGTATTTTTATTGATAAGGAAACTGCTGCCACCATGTAAATTCACAAGGGAGCACTTTGCCATTTTCACCACTTTGTTTTTTACTTGGTTACTTGGGCCATCTGAGGTTAGAGAATCAGAGATCAATGGAAGAAGAGAAAAAAATGCAGTCTATGTCAAAAAATGCAGGTTTTTAGAGGAGACAAATTGTGCAGGGATGTGTATTAATCTTTGCAAAATTCCTACTCAATCGTTTATAAAGAACGCTCTCGGTATGCCGGTGAACATGATACCAAATTTTGATGACATGAGTTGTGAGATGATATTTGGGCAGGATCCTCCATCATCAATGGATGATCCATCACTGAATCAACCATGCTATAAACAATGCAAGGCATATAAAAGTCATGAAACAAACTGCCTCAATTAA 774 0.3721 MEANVFSQNRISKLTSSTLFNLIKHKPQHAPSVVSVLRNTSNHDINDKTTNNSTRTVYKDSWFDLVAINHLSKSVQAATGIRNNESGYESLVEAAIMAKQKFNSIEQQEVIIQALNRLFPESVFLLIRKLLPPCKFTREHFAIFTTLFFTWLLGPSEVRESEINGRREKNAVYVKKCRFLEETNCAGMCINLCKIPTQSFIKNALGMPVNMIPNFDDMSCEMIFGQDPPSSMDDPSLNQPCYKQCKAYKSHETNCLN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03928 257 Pfam Beta-carotene isomerase D27-like, C-terminal 151 231 IPR025114 GO:0005506
Vivi6g03928 257 PANTHER BETA-CAROTENE ISOMERASE D27 33 255 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03928 Vivi-Chr6 135577254 135580979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03928 K17911 - gmx:100782912 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03928 6 135577254 135580979 Vivi1g06480 1 147079440 147085427 PCT