Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06480 ATGGATGCAAAAATGATTACACATAACATGAGCCTAACACCAACTCTAGCTCATTGGAACCTAAGACTCAAACCAAAACCCACTTTTGTAGTTGGAGTTCTTGCACGTCCTACAGAAGAAACATTAAGCAAAACTCATGTGTACAAAGATAATTGGTTTGATAAGTTAGCTATAAACCATTTATCAAAAAGTGTTCAAGCAGCAACAGGAATCAGTAATGATAAGAGTGGTTTTGATAGCCTTGTTGAGGCAGCTACTGTGGCTTCGAAGAAGTTTAGTCCTGTTCAACAGCAAGAAGTTGTTTTAGATGCACTTGACAGAGCCTTTCCAAAGCCAATACTTTCGGTGATAAGGAGAGTGATGCCACCATCAAAATTAGCAAGGGAATATTTTGCCGTCTTCACCACTTTGTTTTTTGCTTGGTTACTCGGTCCATCCGAGGTGAGAGAATCAGAAGTCAATGGAAAGAAAGAAAAAAACATTGTCTACATAAAAAAGTGCAGATTCTTAGAAGAAACAAATTGTGTTGGAATGTGTACTAATCTCTGCAAAATGCCATCTCAAATATTCATAAAAGACTCCTTTGGTATGCCAGTCAACATGGTCCCAAATTTTGATGATATGAGTTGTGAGATGATATTTGGCCAGGAACCACCATCATCAACTGATGATCCTGCACTCAAGCAACCCTGCTATAAAATATGCAAAGCAAAGAAAAATCATGCAACAAATTGTCTTAGCTAA 744 0.3777 MDAKMITHNMSLTPTLAHWNLRLKPKPTFVVGVLARPTEETLSKTHVYKDNWFDKLAINHLSKSVQAATGISNDKSGFDSLVEAATVASKKFSPVQQQEVVLDALDRAFPKPILSVIRRVMPPSKLAREYFAVFTTLFFAWLLGPSEVRESEVNGKKEKNIVYIKKCRFLEETNCVGMCTNLCKMPSQIFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPSSTDDPALKQPCYKICKAKKNHATNCLS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06480 247 PANTHER BETA-CAROTENE ISOMERASE D27 23 245 IPR038938 -
Vivi1g06480 247 Pfam Beta-carotene isomerase D27-like, C-terminal 141 222 IPR025114 GO:0005506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06480 Vivi-Chr1 147079440 147085427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06480 K17911 - gmx:100782912 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03928 6 135577254 135580979 Vivi1g06480 1 147079440 147085427 PCT