Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03910 ATGGCAACAATTATTGCTGGCACCTCAACTTCTTCAATCATCCGCTCAGGTCTTGTGTACAAGCAACCTCTTGGAGTCTCATTCCATACCGTTGTTGGGTTGCCATCAATGGCTAAGGTTGGAAGAGTGAGGTGTTCCATCGAAGGAAAGCCTGATGTGCAAGAAAGCAGCTCAAACATAGGAATGGGAGCATCCCTGATAGCAGCTATCTCTGCTGCAACCATATCAAGCCCGGCAGCCATGGCTTTGGTAGATGAGAGAATGAGCACTGAAGGAACCGGGCTTCCCTTTGGGCTCAGCAATAATCTTCTTGGTTGGATCTTGTTTGGTGTCTTTGGTCTTATTTGGACTTTCTATTTTATCTATGCTTCCTCCCTTGACGAGGATGACGATTCTGGATTGTCTCTGTAA 411 0.4647 MATIIAGTSTSSIIRSGLVYKQPLGVSFHTVVGLPSMAKVGRVRCSIEGKPDVQESSSNIGMGASLIAAISAATISSPAAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFIYASSLDEDDDSGLSL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03910 136 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 136 IPR009806 GO:0009507|GO:0009523|GO:0015979
Vivi6g03910 136 Pfam Photosystem II reaction centre W protein (PsbW) 1 136 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03910 Vivi-Chr6 135283440 135284120 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03910 K02721 - gmx:100526966 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03910 6 135283440 135284120 Vivi1g06495 1 147582712 147583476 PCT