Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03909 ATGAAGCAATCTCATCGGTGGCAGAGGACTTTGCTCCTCTGTCTCCTTTCTCTCTCCGTCGTAGCTCCGGTCATTTTCGTCTCTCGCAGGCTTCAACTTGTAACTCGCGATGGTCGGAGAGAGTTTCTTGATGATTTATCAAGTGTGAAATATAGAACAGATCCTTTAAAGTTAAATGCTGTAGAACAGGAAGACTCGGAAGAATTAGAAGAGCCAAAACAAGTTGTTTATAAAGAAAATGATTTTGGTTCCAAGAATAGCAATGATTCGGAAAAAAATAATGATTATGAGGACTCGGAAGATTTAGAAGAGCCAAAGCAAGTTGTTTATAAAGAAAATGATTTTGGTTCCAAGAATAGCACTGATTCAGAAAAAAATAATGATTATGAGGACTCGGAAGAATTAGAAGAGTCAAAGAAAGTTGTTTATAAAGAAAATGATTTTGGTTCCAAGAATAGCGACAATTTGGAAAACAATAATGAATCTGAGGACTCGAGAATTGAGGGGTCCAGAAATAATTACTTGGAAAAAAAAGAATTTGACCATGATGGTGATGAAACACAAGACCAGGAAGCTCAGCAGAAAGGATTGTCCTCCACATATGAAGATCAGGAAGACTCGGAAGAATTAGAAGAGCCAAAGCAAGTTGTTTATAAAGAAAATGATTTTGGTTCCAAGAATAGTGACGATTCGGAAAAAAATAATGATTCTGAGGACTCAAGAATTGAGGGGTCCAGAAATAATTACTTGAAAAAAAAAGAATTCGATCATGATGATGAAACACAAGACCGGGAAGCTCAGCAGAAAGAATTGTCCTCCACGGATGGAGATCAGGAAGACTCGGAAGAATTAGAAGAGGCCAAGCAAGTTGGTTATAAAGAAAATGATTTTGGTTCCACGGTTAGAGACCCTTCGGAAAAAAATATTGATCCTGAGGAGTCTAGAATTAAGGGGTCCAGAAATAATTTTTTGGAAAAGAAAGAATTTGACCATGATGAAACAAAAGACCAAGAAGCTCAGCAAAAAGGATTATCCTCCACGGGCAGAGATCAGAAGAAATTTAATACAACAGTTATGGACAATCGGAATATACAAACTCCCTTTCAAAGAAAGAAAGTTGAGAATATTATTAAAGTTACTGAAAAGCAATCTGGTATGACAGTAAGCCGACATCATCAGATTTCACGCCGTCAGTCTCGCAAAGTGACAAATCAGACAGTTATGGAGATTAAGGATCAAATTATCAGAGCCAGAGCATACTTGGGATTGTCTCCACCAAGCAGCACCTCACACTTGGTGAAGGAGTTGAAGATGCGAATTAGAGAGATGGAACATGCTGTTGGAGAAGCTACCAAAGATTCTGATCTTTCAAGGAGTGCTTTGCAGAAAATGAAACGCATGGAGGGTTCACTGTCTAAAGCCAACCGTGCTTTCCCAAACTGCGCTGCTATGGCTGCTAAGCTCCGTGCGATGCATGATAACGCTGAAGAACAAGTTCGTTCTCATCAACACGAAGTAACCCATCTTGTTTATCTTGCTGCTAGGACCACCCCTAAAGGTCTTCACTGTCTTTCTATGCAACTAACTGCTGATTACTTTTCCCTGAGACCTGAGGATAGAAAGCTGCCAAATGAAAATAAGATTCATGATCCGGAACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGGAGTGGTTGTTAACTCAACCGTGTCTAATTCCAAGGAACAGGAAAAACTGGTTTTACACATAGTGACCAATTCACTCAACTTTCCTTCATTCTCAATGTGGTTCTTATTAAACCCTCCTGGGAATGCCTCCGTCCACATACAGAACATAGACAATTTTGAGTGGTTGTCCAAGTACAATACATTCAAGAAACAAAATGCCAGTGATCCAAGATATACTTCTGAATTGAACTACCTTCGGTTCTACCTGCCAGATATCTTCCCCACTCTAAATAAGATTTTGCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGCACGCTATGGAATATTAACATGAATGAAAAAGTAATCACAGGAGTTGGGACTTGCCAGGAAGGTGAAACTTCATTTCGCAGGATGGATATGTTCATAAACTTCTCAAATCCATACATTGCAAAGAGGTTTGATGTCAATGCTTGTACATGGGCATTCGGGATGAACTTGTTTGATTTGCAGCAGTGGAGGAGGCATAATTTGACTGGTGTATATCACAAATATTTGCAAAAGGGTTCCAACATGCCATTGTTTAGCACCGGCAGTCTGCCATTAGGCTGGCTCACCTTTTATAACAAAACGATGGTTTTGGACAGACGGTGGCACATTGTTGGTCTTGGTTATGACTCGGACATTGACACAAAAAAGATTGAGCAAGCTGCTGTTATCCACTTTGATGGAATTAAGAAGCCATGGATGGATATTGGGTATGCAAGATACAAGAGTTATTGGTCCAAATTTATCAAGTTTGACCTCCCTCTTTTGCAACGTTGCAATATCCAGGCGTAG 2526 0.3963 MKQSHRWQRTLLLCLLSLSVVAPVIFVSRRLQLVTRDGRREFLDDLSSVKYRTDPLKLNAVEQEDSEELEEPKQVVYKENDFGSKNSNDSEKNNDYEDSEDLEEPKQVVYKENDFGSKNSTDSEKNNDYEDSEELEESKKVVYKENDFGSKNSDNLENNNESEDSRIEGSRNNYLEKKEFDHDGDETQDQEAQQKGLSSTYEDQEDSEELEEPKQVVYKENDFGSKNSDDSEKNNDSEDSRIEGSRNNYLKKKEFDHDDETQDREAQQKELSSTDGDQEDSEELEEAKQVGYKENDFGSTVRDPSEKNIDPEESRIKGSRNNFLEKKEFDHDETKDQEAQQKGLSSTGRDQKKFNTTVMDNRNIQTPFQRKKVENIIKVTEKQSGMTVSRHHQISRRQSRKVTNQTVMEIKDQIIRARAYLGLSPPSSTSHLVKELKMRIREMEHAVGEATKDSDLSRSALQKMKRMEGSLSKANRAFPNCAAMAAKLRAMHDNAEEQVRSHQHEVTHLVYLAARTTPKGLHCLSMQLTADYFSLRPEDRKLPNENKIHDPELYHYAVFSDNVLACGVVVNSTVSNSKEQEKLVLHIVTNSLNFPSFSMWFLLNPPGNASVHIQNIDNFEWLSKYNTFKKQNASDPRYTSELNYLRFYLPDIFPTLNKILLFDHDVVVQQDLSTLWNINMNEKVITGVGTCQEGETSFRRMDMFINFSNPYIAKRFDVNACTWAFGMNLFDLQQWRRHNLTGVYHKYLQKGSNMPLFSTGSLPLGWLTFYNKTMVLDRRWHIVGLGYDSDIDTKKIEQAAVIHFDGIKKPWMDIGYARYKSYWSKFIKFDLPLLQRCNIQA 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03909 841 Pfam Glycosyl transferase family 8 523 814 IPR002495 GO:0016757
Vivi6g03909 841 Coils Coil 153 173 - -
Vivi6g03909 841 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 556 830 IPR029044 -
Vivi6g03909 841 MobiDBLite consensus disorder prediction 340 354 - -
Vivi6g03909 841 MobiDBLite consensus disorder prediction 211 275 - -
Vivi6g03909 841 MobiDBLite consensus disorder prediction 62 354 - -
Vivi6g03909 841 MobiDBLite consensus disorder prediction 299 339 - -
Vivi6g03909 841 Coils Coil 433 453 - -
Vivi6g03909 841 MobiDBLite consensus disorder prediction 383 403 - -
Vivi6g03909 841 Coils Coil 485 505 - -
Vivi6g03909 841 MobiDBLite consensus disorder prediction 70 93 - -
Vivi6g03909 841 SUPERFAMILY Nucleotide-diphospho-sugar transferases 554 838 IPR029044 -
Vivi6g03909 841 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 352 839 IPR029993 GO:0047262
Vivi6g03909 841 MobiDBLite consensus disorder prediction 103 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03909 Vivi-Chr6 135273002 135283305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03909 388 841 Glycosyltransferase AT1G06780 55.044 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03909 K13648 - gmx:100811619 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03909 6 135273002 135283305 Vivi1g06496 1 147583717 147589037 PCT