Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03891 TCCATTGTTGTTCATTCAGATTATGATGCCAACCCCAGCTTTACACAGATCTTGGTAATCTCATCTATTGGGTTGATATTTTTCATAGCATTGCATTATCACCTCAAAAAGATTAGAGATCAAAAGATCATTCCACGTTTAAGATTATCGCGCGCAGGTCACCCCCCAAAACTCGAAAGATTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAGGATAGACGAATCGGTCCTGATCTAAACAGATTGGCTTCTGAATACATAAGTAAATATGAGGGGTTTGAAGATGATATTTATGCCTATTTTGAGAATGAACCAGATGCTGATTCACTTTATGTCAAGTTGGTGGAAGAGTTTGAGAGATGCATTCTTAGTTACTTTGGATTTCATTGGAACCATTGTGACATATTGATAAGTCAGGTGTTGAGCTCGGAAATTTCTGAGCCAAAAAAGAAGTTAAAGAACATAGTTATGGCCGCTACTAGGGATCAAAGGTTCGAGAGAGTTGCCAAGAGTCTGAAGGTGGCTAGTGTTTTTAATACATTGGTGGAAGAGATGAAAGCGATGGGTATTGCAGTAAACGATGACTCTCAATGTACAGAGGTAATGGCTCCTGTAGCTCACAGTGATAGGAGCCCGGTCCTCCTTCTAATGGGGGGAGGTATGGGAGCTGGCAAGAGCACTGTACTCAAGGATATTCTCAAAGAACCTTTCTGGGCAGGAGCTTCAGGAAATGCCGTAGTCATTGAAGCAGATGCCTTCAAAGAATCAGATGTCATCTACAAGGCACTTCGCTCAACAGGCCATCATGACATGATTCGAACGGCCGAACTGGTACACCAATCATCCACAGATGCAGCATCATCCCTCTTGGTAACAGCACTAAATGAGGGTCGTGATGTAATTATGGACGGCACACTCTCCTGGGTTCCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTTCACCGCCGCCGTTATCGCATGGGAGTTGGCTACAGAGTCAACAAAGACAGAAGCGTAACTGAAAACTATTGGGAACGAATTGAAGATGAAGAACCAGAACAAATTGGAGGAAAAAAGAGAAAACCATATAGGATTGAGCTTGTTGGAGTAGTGTGTGATGCTTACCTTGCTGTTGTTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCTGTGAGAGTAAAATCGCAATTGAAATCCCACAAGAGATTTGCTGATGCATTTATGACATACTGTCAATTAGTAGACAATGCCCGTCTATACTGCACAAATGCATTGGAAGGCCCAGCCAAGTTGATAGGATGGAAAGATAGAGACAGAACCTTGCTGGTTGATCCAGATGAAATTGACTGTTTGAAGAGGGTTGCAAAGTTAAATGAAGATGCCAACTCCATATATGAACTCTACAAACAACCCAACCCAGCTTGTGAAGCTGGATCCGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAAGAGCTCAAATTTTCAATCCAAGAAATTGAGCGCTTGAAATGA 1539 0.4204 SIVVHSDYDANPSFTQILVISSIGLIFFIALHYHLKKIRDQKIIPRLRLSRAGHPPKLERFSHYVARQMGFKDRRIGPDLNRLASEYISKYEGFEDDIYAYFENEPDADSLYVKLVEEFERCILSYFGFHWNHCDILISQVLSSEISEPKKKLKNIVMAATRDQRFERVAKSLKVASVFNTLVEEMKAMGIAVNDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGASGNAVVIEADAFKESDVIYKALRSTGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGVGYRVNKDRSVTENYWERIEDEEPEQIGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVKSQLKSHKRFADAFMTYCQLVDNARLYCTNALEGPAKLIGWKDRDRTLLVDPDEIDCLKRVAKLNEDANSIYELYKQPNPACEAGSVWKDIVLSPSRLNIQQELKFSIQEIERLK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03891 512 Pfam Zeta toxin 207 320 IPR010488 GO:0005524|GO:0016301
Vivi6g03891 512 PANTHER UNCHARACTERIZED 9 511 IPR044802 -
Vivi6g03891 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 329 IPR027417 -
Vivi6g03891 512 Gene3D - 196 432 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03891 Vivi-Chr6 134901862 134905668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03891 - - gmx:100794775 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03891 6 134901862 134905668 Vivi6g03891 6 134901862 134905668 ECH
Vivi6g03891 6 134901862 134905668 Vivi1g06653 1 154261389 154264434 PCT